* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_002695.2
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF06519.13
|
0.78
|
7
|
4819.0
|
same-strand
|
TolA C-terminal
|
2
|
PF07676.14
|
0.89
|
8
|
3455
|
same-strand
|
WD40-like Beta Propeller Repeat
|
3
|
PF04052.15
|
0.89
|
8
|
3455
|
same-strand
|
TolB amino-terminal domain
|
4
|
PF00691.22
|
1.0
|
9
|
2902.5
|
same-strand
|
OmpA family
|
5
|
PF13174.8
|
1.0
|
9
|
2103.0
|
same-strand
|
Tetratricopeptide repeat
|
6
|
PF16331.7
|
1.0
|
9
|
2103.0
|
same-strand
|
TolA binding protein trimerisation
|
7
|
PF13432.8
|
1.0
|
9
|
2103.0
|
same-strand
|
Tetratricopeptide repeat
|
8
|
PF02445.18
|
1.0
|
9
|
-74.5
|
same-strand
|
Quinolinate synthetase A protein
|
9
|
PF04973.14
|
1.0
|
9
|
32.0
|
same-strand
|
Nicotinamide mononucleotide transporter
|
10
|
PF01545.23
|
1.0
|
9
|
747.5
|
opposite-strand
|
Cation efflux family
|
11
|
PF13985.8
|
0.89
|
8
|
1802
|
opposite-strand
|
YbgS-like protein
|
12
|
PF00793.22
|
0.89
|
8
|
2498
|
same-strand
|
DAHP synthetase I family
|
++ More..