Result : EXP00637
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | EXP00637 |
| NCBI Accession ID | CP001509.3 |
| Organism | Escherichia coli BL21(DE3) |
| Left | 4083738 |
| Right | 4083809 |
| Strand | + |
| Nucleotide Sequence | ATGGCTATTACCTCAGCCTTCCAAGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCTCCAAGATGTGCTGA |
| Sequence | MAITSAFQADDAGSIPAARSKMC |
| Source of smORF | Ribo-seq |
| Function | |
| Pubmed ID | 30904393 |
| Domain | |
| Functional Category | Function not yet assigned |
| Uniprot ID | |
| ORF Length (Amino Acid) | 23 |
++ More..
| Conservation Analysis |
No. of Species: 228
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 4105259 | 4105330 | - | NZ_CP048796.1 | Providencia vermicola |
| 2 | 3572192 | 3572263 | - | NZ_CP031123.2 | Providencia huaxiensis |
| 3 | 343230 | 343301 | + | NZ_CP012266.1 | Cronobacter dublinensis subsp. dublinensis LMG 23823 |
| 4 | 966716 | 966787 | + | NZ_CP029736.1 | Providencia rettgeri |
| 5 | 4109900 | 4109971 | - | NZ_LS483422.1 | Providencia heimbachae |
| 6 | 1186649 | 1186720 | + | NZ_CP023536.1 | Providencia alcalifaciens |
| 7 | 5501722 | 5501793 | - | NC_005126.1 | Photorhabdus laumondii subsp. laumondii TTO1 |
| 8 | 4984831 | 4984902 | + | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
| 9 | 1689793 | 1689864 | - | NZ_CP011104.1 | Photorhabdus thracensis |
| 10 | 4881390 | 4881461 | - | NC_012962.1 | Photorhabdus asymbiotica |
| 11 | 4360358 | 4360429 | + | NC_003197.2 | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 |
| 12 | 4148125 | 4148196 | + | NZ_AP014857.1 | Escherichia albertii |
| 13 | 1338184 | 1338249 | + | NZ_AP014857.1 | Escherichia albertii |
| 14 | 2005435 | 2005500 | - | NZ_AP014857.1 | Escherichia albertii |
| 15 | 4247627 | 4247692 | + | NZ_AP014857.1 | Escherichia albertii |
| 16 | 4175687 | 4175758 | + | NC_000913.3 | Escherichia coli str. K-12 substr. MG1655 |
| 17 | 4195439 | 4195510 | + | NC_004337.2 | Shigella flexneri 2a str. 301 |
| 18 | 712076 | 712147 | + | NC_004337.2 | Shigella flexneri 2a str. 301 |
| 19 | 1936878 | 1936949 | - | NC_004337.2 | Shigella flexneri 2a str. 301 |
| 20 | 3118720 | 3118791 | + | NZ_CP057657.1 | Escherichia fergusonii |
| 21 | 3168721 | 3168792 | - | NZ_CP016176.1 | Xenorhabdus hominickii |
| 22 | 2129322 | 2129393 | + | NZ_CP053416.1 | Salmonella bongori |
| 23 | 215698 | 215769 | + | NZ_LR134340.1 | Escherichia marmotae |
| 24 | 108194 | 108265 | + | NZ_CP061527.1 | Shigella dysenteriae |
| 25 | 4199788 | 4199859 | - | NZ_CP072455.1 | Xenorhabdus budapestensis |
| 26 | 3180408 | 3180479 | - | NZ_CP060401.1 | Xenorhabdus nematophila |
| 27 | 4071382 | 4071453 | - | NC_013892.1 | Xenorhabdus bovienii SS-2004 |
| 28 | 268466 | 268537 | + | NZ_FO704550.1 | Xenorhabdus doucetiae |
| 29 | 3493865 | 3493936 | - | NZ_FO704551.1 | Xenorhabdus poinarii G6 |
| 30 | 3694667 | 3694738 | - | NZ_CP012268.1 | Cronobacter muytjensii ATCC 51329 |
| 31 | 334231 | 334302 | + | NZ_CP012257.1 | Cronobacter universalis NCTC 9529 |
| 32 | 3817483 | 3817554 | - | NZ_CP013940.1 | Cronobacter malonaticus LMG 23826 |
| 33 | 349350 | 349421 | + | NZ_CP012264.1 | Cronobacter condimenti 1330 |
| 34 | 3097022 | 3097093 | - | NZ_CP027107.1 | Cronobacter sakazakii |
| 35 | 279539 | 279610 | + | NZ_LR134494.1 | Serratia quinivorans |
| 36 | 1437112 | 1437183 | - | NZ_CP015750.1 | Pectobacterium wasabiae CFBP 3304 |
| 37 | 253000 | 253071 | + | NZ_CP009125.1 | Pectobacterium atrosepticum |
| 38 | 262863 | 262934 | + | NC_015567.1 | Serratia plymuthica AS9 |
| 39 | 3831178 | 3831249 | - | NZ_CP015749.1 | Pectobacterium parmentieri |
| 40 | 5575700 | 5575771 | + | NZ_CP015113.1 | Kosakonia radicincitans |
| 41 | 5149892 | 5149963 | - | NZ_CP014007.2 | Kosakonia oryzae |
| 42 | 2909223 | 2909294 | - | NZ_CP045300.1 | Kosakonia arachidis |
| 43 | 280577 | 280648 | + | NZ_CP050150.1 | Hafnia alvei |
| 44 | 4683530 | 4683601 | - | NZ_CP065044.1 | Pectobacterium aroidearum |
| 45 | 275381 | 275452 | + | NZ_LT906479.1 | Serratia ficaria |
| 46 | 3712240 | 3712311 | + | NZ_CP023529.1 | Lelliottia amnigena |
| 47 | 227967 | 228038 | + | NZ_CP063425.1 | Kosakonia pseudosacchari |
| 48 | 3381274 | 3381345 | + | NZ_CP016337.1 | Kosakonia sacchari |
| 49 | 2222258 | 2222329 | + | NZ_CP011254.1 | Serratia fonticola |
| 50 | 2363344 | 2363415 | - | NZ_CP009781.1 | Yersinia aldovae 670-83 |
| 51 | 4788320 | 4788391 | - | NZ_CP071320.1 | Serratia ureilytica |
| 52 | 239387 | 239458 | + | NZ_CP034938.1 | Pectobacterium odoriferum |
| 53 | 244868 | 244939 | + | NZ_CP038662.1 | Serratia nematodiphila |
| 54 | 4730408 | 4730479 | + | NZ_CP016948.1 | Serratia surfactantfaciens |
| 55 | 293088 | 293159 | + | NC_014306.1 | Erwinia billingiae Eb661 |
| 56 | 4016431 | 4016502 | + | NZ_CP017482.1 | Pectobacterium polaris |
| 57 | 4590496 | 4590567 | - | NZ_CP051652.1 | Pectobacterium carotovorum |
| 58 | 1856746 | 1856817 | + | NZ_CP047495.1 | Pectobacterium brasiliense |
| 59 | 262733 | 262804 | + | NZ_CP038498.1 | Pectobacterium punjabense |
| 60 | 265525 | 265596 | + | NZ_CP048784.1 | Serratia liquefaciens |
| 61 | 4362644 | 4362715 | - | NZ_CP046293.1 | Yersinia intermedia |
| 62 | 1956060 | 1956131 | + | NZ_CP007230.1 | Yersinia similis |
| 63 | 318859 | 318930 | + | NZ_CP032487.1 | Yersinia hibernica |
| 64 | 4364435 | 4364506 | - | NZ_CP011118.1 | Yersinia enterocolitica |
| 65 | 4334814 | 4334885 | - | NZ_CP043727.1 | Yersinia canariae |
| 66 | 4245022 | 4245093 | - | NZ_LR134373.1 | Yersinia pseudotuberculosis |
| 67 | 3205190 | 3205261 | + | NZ_CP009787.1 | Yersinia rohdei |
| 68 | 3707464 | 3707535 | - | NZ_CP034035.1 | Brenneria rubrifaciens |
| 69 | 1947879 | 1947950 | - | NZ_CP011078.1 | Yersinia ruckeri |
| 70 | 2237351 | 2237422 | - | NZ_CP014136.1 | Gibbsiella quercinecans |
| 71 | 1816903 | 1816974 | + | NZ_CP065640.1 | Serratia rubidaea |
| 72 | 3891180 | 3891254 | + | NZ_CP040449.1 | Aeromonas simiae |
| 73 | 599085 | 599156 | - | NZ_CP007044.2 | Chania multitudinisentens RB-25 |
| 74 | 275294 | 275365 | + | NC_013961.1 | Erwinia amylovora CFBP1430 |
| 75 | 2712648 | 2712719 | + | NZ_AP019007.1 | Enterobacter oligotrophicus |
| 76 | 300756 | 300839 | + | NZ_AP022188.1 | Aeromonas media |
| 77 | 252362 | 252445 | + | NZ_LR134376.1 | Aeromonas encheleia |
| 78 | 3325202 | 3325273 | - | NZ_CP045769.1 | Enterobacter cancerogenus |
| 79 | 3713370 | 3713441 | - | NZ_CP023567.1 | Erwinia pyrifoliae |
| 80 | 173044 | 173115 | + | NC_010694.1 | Erwinia tasmaniensis Et1/99 |
| 81 | 226611 | 226682 | + | NC_015968.1 | Enterobacter soli |
| 82 | 1275273 | 1275350 | - | NZ_CP039701.1 | Vibrio cyclitrophicus |
| 83 | 4590961 | 4591032 | - | NZ_CP013990.1 | Leclercia adecarboxylata |
| 84 | 227602 | 227673 | + | NZ_CP043318.1 | Enterobacter chengduensis |
| 85 | 2389690 | 2389761 | - | NZ_CP025034.2 | Enterobacter sp. SGAir0187 |
| 86 | 212768 | 212839 | + | NZ_CP017184.1 | Enterobacter roggenkampii |
| 87 | 214860 | 214931 | + | NZ_CP027986.1 | Enterobacter sichuanensis |
| 88 | 198624 | 198695 | + | NZ_AP022508.1 | Enterobacter bugandensis |
| 89 | 3439765 | 3439836 | + | NZ_CP017279.1 | Enterobacter ludwigii |
| 90 | 240868 | 240939 | + | NZ_CP009756.1 | Enterobacter cloacae |
| 91 | 280503 | 280577 | + | NZ_CP028897.1 | Dongshaea marina |
| 92 | 3546423 | 3546488 | - | NZ_CP036536.1 | Salinimonas lutimaris |
| 93 | 1329724 | 1329792 | + | NZ_AP014636.1 | Vibrio tritonius |
| 94 | 39226 | 39300 | + | NZ_CP040991.1 | Vibrio furnissii |
| 95 | 348253 | 348327 | + | NZ_CP071326.1 | Photobacterium ganghwense |
| 96 | 3507614 | 3507691 | - | NZ_CP032090.1 | Pseudoalteromonas donghaensis |
| 97 | 3883535 | 3883612 | - | NZ_CP046670.1 | Alteromonas mediterranea |
| 98 | 1779791 | 1779859 | + | NZ_LT906448.1 | Pasteurella dagmatis |
| 99 | 1146671 | 1146739 | - | NZ_CP028926.1 | Pasteurella multocida |
| 100 | 245002 | 245079 | + | NZ_CP009468.1 | Vibrio harveyi |
| 101 | 244057 | 244131 | - | NZ_LR134167.1 | Avibacterium volantium |
| 102 | 233055 | 233123 | + | NZ_CP016605.1 | Bisgaardia hudsonensis |
| 103 | 1170813 | 1170884 | - | NZ_CP009355.1 | Vibrio tubiashii ATCC 19109 |
| 104 | 860905 | 860976 | - | NZ_CP054043.1 | Yersinia mollaretii ATCC 43969 |
| 105 | 3448677 | 3448754 | - | NZ_CP046268.1 | Vibrio spartinae |
| 106 | 165146 | 165223 | + | NZ_CP013187.1 | Pseudoalteromonas phenolica |
| 107 | 3252878 | 3252958 | - | NZ_CP011030.1 | Pseudoalteromonas issachenkonii |
| 108 | 3218101 | 3218181 | - | NZ_CP011041.1 | Pseudoalteromonas tetraodonis |
| 109 | 1443806 | 1443886 | + | NZ_CP014056.2 | Grimontia hollisae |
| 110 | 617942 | 618019 | - | NZ_CP032094.1 | Vibrio alfacsensis |
| 111 | 2410738 | 2410809 | + | NZ_CP025792.1 | Vibrio jasicida 090810c |
| 112 | 3005088 | 3005159 | - | NZ_CP009354.1 | Vibrio tubiashii ATCC 19109 |
| 113 | 3770469 | 3770534 | - | NZ_CP031769.1 | Salinimonas sediminis |
| 114 | 2677902 | 2677985 | - | NZ_CP040021.1 | Salinivibrio kushneri |
| 115 | 160488 | 160565 | - | NZ_CP005974.1 | Photobacterium gaetbulicola Gung47 |
| 116 | 3315886 | 3315969 | - | NZ_CP071325.1 | Photobacterium ganghwense |
| 117 | 40457 | 40528 | - | NZ_CP009467.1 | Vibrio harveyi |
| 118 | 1992844 | 1992915 | + | NZ_CP019959.1 | Vibrio owensii |
| 119 | 3386540 | 3386611 | - | NZ_CP011036.1 | Pseudoalteromonas nigrifaciens |
| 120 | 3289052 | 3289123 | + | NZ_CP018312.1 | Vibrio rotiferianus |
| 121 | 143637 | 143708 | + | NZ_CP031781.1 | Vibrio parahaemolyticus |
| 122 | 3085227 | 3085298 | - | NZ_CP030788.1 | Vibrio campbellii |
| 123 | 588914 | 588985 | + | NC_013456.1 | Vibrio antiquarius |
| 124 | 11366 | 11437 | + | NZ_CP009977.1 | Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 |
| 125 | 3080780 | 3080851 | - | NC_007481.1 | Pseudoalteromonas translucida |
| 126 | 125970 | 126050 | - | NZ_CP070624.1 | Photobacterium damselae subsp. damselae |
| 127 | 269326 | 269397 | + | NZ_CP045350.1 | Vibrio aquimaris |
| 128 | 17943 | 18011 | + | NZ_CP016416.1 | Vibrio scophthalmi |
| 129 | 3303876 | 3303953 | - | NZ_CP067057.1 | Rahnella aceris |
| 130 | 194098 | 194166 | - | NZ_CP018804.1 | Histophilus somni |
| 131 | 850024 | 850092 | + | NZ_LR134510.1 | Actinobacillus delphinicola |
| 132 | 2411467 | 2411547 | + | NZ_CP015137.1 | Dickeya solani IPO 2222 |
| 133 | 53375 | 53443 | + | NZ_CP016414.1 | Vibrio scophthalmi |
| 134 | 1956830 | 1956907 | - | NZ_CP021376.1 | Oceanisphaera avium |
| 135 | 928838 | 928912 | - | NC_011313.1 | Aliivibrio salmonicida LFI1238 |
| 136 | 720048 | 720116 | + | NZ_CP022355.1 | Paraphotobacterium marinum |
| 137 | 199878 | 199946 | + | NZ_CP022741.1 | Vibrio qinghaiensis |
| 138 | 4333383 | 4333457 | - | NC_012880.1 | Musicola paradisiaca Ech703 |
| 139 | 280504 | 280584 | + | NZ_CP031416.1 | Gallaecimonas mangrovi |
| 140 | 409415 | 409483 | + | NZ_CP007445.1 | Gilliamella apicola |
| 141 | 138436 | 138507 | + | NZ_CP032093.1 | Vibrio alfacsensis |
| 142 | 2274972 | 2275052 | - | NZ_CP009056.1 | Frischella perrara |
| 143 | 3812378 | 3812446 | - | NZ_CP020931.1 | Marinobacter salarius |
| 144 | 4810499 | 4810573 | - | NZ_CP023525.1 | Cedecea neteri |
| 145 | 4385750 | 4385824 | - | NZ_LR134201.1 | Cedecea lapagei |
| 146 | 1068959 | 1069036 | - | NZ_CP072425.1 | Pseudoalteromonas viridis |
| 147 | 2965089 | 2965172 | - | NZ_CP031961.1 | Pseudoalteromonas tunicata |
| 148 | 1387185 | 1387253 | - | NZ_CP021377.1 | Oceanisphaera profunda |
| 149 | 2834223 | 2834300 | - | NZ_CP047475.1 | Vibrio astriarenae |
| 150 | 5662035 | 5662118 | - | NZ_CP048878.1 | Spartinivicinus ruber |
| 151 | 4526808 | 4526885 | - | NZ_CP034036.1 | Brenneria nigrifluens DSM 30175 = ATCC 13028 |
| 152 | 54528 | 54605 | + | NC_015554.1 | Alteromonas naphthalenivorans |
| 153 | 4025201 | 4025278 | - | NZ_CP014322.1 | Alteromonas addita |
| 154 | 3535184 | 3535252 | - | NZ_LR134531.1 | Pragia fontium |
| 155 | 3500206 | 3500274 | - | NZ_LS483470.1 | Leminorella richardii |
| 156 | 50712 | 50789 | - | NC_004545.1 | Buchnera aphidicola str. Bp (Baizongia pistaciae) |
| 157 | 3942824 | 3942901 | - | NZ_CP014137.1 | Brenneria goodwinii |
| 158 | 251763 | 251843 | + | NZ_CP042220.2 | Dickeya poaceiphila |
| 159 | 614586 | 614657 | - | NZ_CP016415.1 | Vibrio scophthalmi |
| 160 | 182276 | 182344 | + | NC_021883.1 | Mannheimia haemolytica USMARC_2286 |
| 161 | 1742051 | 1742119 | + | NZ_CP040863.1 | Rodentibacter heylii |
| 162 | 1942341 | 1942409 | - | NZ_CP009159.1 | Actinobacillus suis ATCC 33415 |
| 163 | 2160313 | 2160381 | + | NZ_CP007715.1 | Actinobacillus equuli subsp. equuli |
| 164 | 2113860 | 2113928 | - | NZ_CP006954.1 | Bibersteinia trehalosi USDA-ARS-USMARC-188 |
| 165 | 1312351 | 1312419 | - | NZ_LR134327.1 | Aggregatibacter aphrophilus ATCC 33389 |
| 166 | 1773778 | 1773846 | - | NZ_CP030753.1 | Actinobacillus pleuropneumoniae |
| 167 | 2125912 | 2125980 | - | NC_006300.1 | [Mannheimia] succiniciproducens MBEL55E |
| 168 | 1211241 | 1211309 | - | NC_011852.1 | Glaesserella parasuis SH0165 |
| 169 | 367373 | 367441 | - | NZ_CP029206.1 | Actinobacillus porcitonsillarum |
| 170 | 1717855 | 1717923 | - | NZ_CP015031.1 | Basfia succiniciproducens |
| 171 | 612195 | 612263 | + | NZ_LT906463.1 | Haemophilus pittmaniae |
| 172 | 315549 | 315617 | - | NZ_CP055305.1 | Mannheimia pernigra |
| 173 | 599261 | 599329 | + | NZ_CP061280.1 | Mannheimia bovis |
| 174 | 284541 | 284609 | - | NZ_CP046531.1 | Mannheimia ovis |
| 175 | 782469 | 782537 | - | NZ_CP015029.1 | Frederiksenia canicola |
| 176 | 2012311 | 2012379 | - | NZ_CP006944.1 | Mannheimia varigena USDA-ARS-USMARC-1312 |
| 177 | 393697 | 393765 | - | NZ_LS483443.1 | Aggregatibacter segnis ATCC 33393 |
| 178 | 399531 | 399599 | - | NZ_LS483458.1 | Haemophilus haemolyticus |
| 179 | 737498 | 737566 | + | NZ_CP015425.1 | [Haemophilus] ducreyi |
| 180 | 4521161 | 4521235 | - | NZ_CP006569.1 | Sodalis praecaptivus |
| 181 | 3727888 | 3727962 | + | NZ_CP051180.1 | Ferrimonas lipolytica |
| 182 | 4027670 | 4027738 | - | NZ_CP034752.1 | Jinshanibacter zhutongyuii |
| 183 | 362975 | 363043 | + | NZ_CP029185.2 | Limnobaculum parvum |
| 184 | 85737 | 85802 | - | NZ_CP054057.1 | Scandinavium goeteborgense |
| 185 | 2003266 | 2003334 | + | NZ_CP015839.1 | Marinobacterium aestuarii |
| 186 | 427713 | 427781 | - | NZ_LS483429.1 | Haemophilus aegyptius |
| 187 | 407530 | 407598 | - | NZ_CP009610.1 | Haemophilus influenzae |
| 188 | 275920 | 275991 | + | NC_008709.1 | Psychromonas ingrahamii 37 |
| 189 | 3621221 | 3621301 | - | NZ_CP065534.1 | Lonsdalea populi |
| 190 | 4329475 | 4329546 | - | NZ_CP061081.1 | Marinomonas arctica |
| 191 | 348343 | 348420 | + | NC_006512.1 | Idiomarina loihiensis L2TR |
| 192 | 2310218 | 2310289 | + | NZ_CP015622.1 | Corynebacterium crudilactis |
| 193 | 2195851 | 2195919 | - | NC_020506.1 | Corynebacterium callunae DSM 20147 |
| 194 | 435521 | 435589 | + | NZ_CP033040.1 | Thiomicrorhabdus indica |
| 195 | 1461306 | 1461371 | + | NZ_CP036150.1 | Oceanispirochaeta crateris |
| 196 | 46586 | 46669 | + | NC_015921.1 | Borreliella bissettii DN127 |
| 197 | 273578 | 273652 | + | NC_014541.1 | Ferrimonas balearica DSM 9799 |
| 198 | 2024790 | 2024855 | - | NC_014364.1 | Sediminispirochaeta smaragdinae DSM 11293 |
| 199 | 2725234 | 2725299 | - | NZ_AP017369.1 | Corynebacterium suranareeae |
| 200 | 151977 | 152060 | + | NC_008345.1 | Shewanella frigidimarina NCIMB 400 |
| 201 | 404180 | 404263 | + | NZ_CP034015.1 | Shewanella livingstonensis |
| 202 | 4457999 | 4458082 | - | NZ_CP041036.1 | Shewanella polaris |
| 203 | 2462765 | 2462830 | - | NC_004369.1 | Corynebacterium efficiens YS-314 |
| 204 | 360757 | 360825 | + | NZ_AP020335.1 | Hydrogenovibrio marinus |
| 205 | 1290908 | 1290973 | + | NZ_LR215050.1 | Acholeplasma hippikon |
| 206 | 3315166 | 3315234 | - | NZ_CP035807.1 | Thiospirochaeta perfilievii |
| 207 | 3315069 | 3315143 | - | NZ_CP035807.1 | Thiospirochaeta perfilievii |
| 208 | 47650 | 47715 | + | NZ_CP015796.1 | Borreliella mayonii |
| 209 | 5675018 | 5675098 | - | NC_010506.1 | Shewanella woodyi ATCC 51908 |
| 210 | 1584009 | 1584092 | - | NZ_AP018150.1 | Mycoavidus cysteinexigens |
| 211 | 46579 | 46644 | + | NZ_CP028861.1 | Borreliella garinii |
| 212 | 46433 | 46498 | + | NZ_CP044535.1 | Borrelia maritima |
| 213 | 384531 | 384611 | + | NZ_CP014782.1 | Shewanella psychrophila |
| 214 | 5303327 | 5303407 | - | NC_009831.1 | Shewanella sediminis HAW-EB3 |
| 215 | 160648 | 160728 | + | NC_009092.1 | Shewanella loihica PV-4 |
| 216 | 149359 | 149439 | + | NZ_CP022272.1 | Shewanella marisflavi |
| 217 | 712643 | 712723 | - | NZ_CP009249.1 | Corynebacterium phocae |
| 218 | 58421 | 58492 | + | NC_011244.1 | Borrelia recurrentis A1 |
| 219 | 965479 | 965538 | + | NC_017098.1 | Spirochaeta africana DSM 8902 |
| 220 | 1380749 | 1380808 | - | NC_017098.1 | Spirochaeta africana DSM 8902 |
| 221 | 2123873 | 2123950 | - | NZ_CP011545.1 | Corynebacterium testudinoris |
| 222 | 596953 | 597030 | - | NZ_LS483460.1 | Corynebacterium minutissimum |
| 223 | 2206112 | 2206189 | + | NZ_CP009245.1 | Corynebacterium aquilae DSM 44791 |
| 224 | 3865202 | 3865276 | - | NZ_CP054301.1 | Marinomonas primoryensis |
| 225 | 2039530 | 2039595 | - | NZ_CP007790.1 | Corynebacterium marinum DSM 44953 |
| 226 | 3394137 | 3394208 | + | NZ_CP062803.1 | Cupriavidus basilensis |
| 227 | 3715634 | 3715705 | + | NZ_CP017754.1 | Cupriavidus malaysiensis |
| 228 | 2223647 | 2223724 | - | NZ_LR698967.1 | Corynebacterium ammoniagenes |
| 229 | 1637532 | 1637609 | - | NC_012704.1 | Corynebacterium kroppenstedtii DSM 44385 |
| 230 | 1839492 | 1839569 | - | NZ_LR738855.1 | Corynebacterium rouxii |
| 231 | 2459845 | 2459910 | - | NC_020302.1 | Corynebacterium halotolerans YIM 70093 = DSM 44683 |
| 232 | 2107800 | 2107868 | + | NZ_CP014635.1 | Corynebacterium simulans |
| 233 | 854082 | 854165 | - | NZ_LT906443.1 | Corynebacterium ulcerans |
| 234 | 2454892 | 2454957 | - | NZ_CP068168.1 | Corynebacterium amycolatum |
| 235 | 1882592 | 1882660 | + | NZ_CP011311.1 | Corynebacterium camporealensis |
| 236 | 1566943 | 1567005 | - | NC_014150.1 | Brachyspira murdochii DSM 12563 |
| 237 | 2136690 | 2136755 | - | NZ_CP006764.1 | Corynebacterium doosanense CAU 212 = DSM 45436 |
| 238 | 341127 | 341195 | + | NZ_AP018722.1 | Thiomicrorhabdus aquaedulcis |
| 239 | 2685919 | 2685987 | - | NZ_CP015079.1 | Nocardioides dokdonensis FR1436 |
| 240 | 1220336 | 1220407 | - | NZ_CP017326.1 | Weissella soli |
| 241 | 663092 | 663154 | + | NZ_CP061835.1 | Weissella viridescens |
| 242 | 508130 | 508192 | + | NZ_CP061835.1 | Weissella viridescens |
| 243 | 863258 | 863329 | + | NZ_CP027563.1 | Weissella confusa |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP048796.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF00009.29 | 0.77 | 175 | 182 | same-strand | Elongation factor Tu GTP binding domain |
| 2 | PF03143.19 | 0.78 | 177 | 182 | same-strand | Elongation factor Tu C-terminal domain |
| 3 | PF03144.27 | 0.78 | 177 | 182 | same-strand | Elongation factor Tu domain 2 |
| 4 | PF01926.25 | 0.76 | 174 | 182 | same-strand | 50S ribosome-binding GTPase |
++ More..