* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_002695.2
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF01757.24
|
0.75
|
3
|
4182.0
|
opposite-strand
|
Acyltransferase family
|
2
|
PF12704.9
|
1.0
|
4
|
1750.0
|
same-strand
|
MacB-like periplasmic core domain
|
3
|
PF02687.23
|
1.0
|
4
|
1750.0
|
same-strand
|
FtsX-like permease family
|
4
|
PF00005.29
|
1.0
|
4
|
2027
|
same-strand
|
ABC transporter
|
5
|
PF02463.21
|
1.0
|
4
|
2027
|
same-strand
|
RecF/RecN/SMC N terminal domain
|
6
|
PF00480.22
|
1.0
|
4
|
-74
|
same-strand
|
ROK family
|
7
|
PF02685.18
|
1.0
|
4
|
-74
|
same-strand
|
Glucokinase
|
8
|
PF02146.19
|
1.0
|
4
|
99
|
same-strand
|
Sir2 family
|
9
|
PF13416.8
|
1.0
|
4
|
1076
|
opposite-strand
|
Bacterial extracellular solute-binding protein
|
10
|
PF13343.8
|
1.0
|
4
|
1076
|
opposite-strand
|
Bacterial extracellular solute-binding protein
|
11
|
PF13531.8
|
1.0
|
4
|
1076
|
opposite-strand
|
Bacterial extracellular solute-binding protein
|
12
|
PF01547.27
|
1.0
|
4
|
1076
|
opposite-strand
|
Bacterial extracellular solute-binding protein
|
13
|
PF00528.24
|
1.0
|
4
|
2910
|
opposite-strand
|
Binding-protein-dependent transport system inner membrane component
|
++ More..