Result : B1VE23
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Cell division protein CrgA |
| NCBI Accession ID | AM942444.1 |
| Organism | Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109) |
| Left | 57536 |
| Right | 57814 |
| Strand | - |
| Nucleotide Sequence | ATGCCTAAGTCAAAGATCAATTCCCCGGAGGAGAACTTCGATTCCAGCGCCGCCGCTGGGGTGGATCGCCGTACCCCGGTGAAGCTGAACGCCTCGGGCACGCCACGGTGGTACATCGTGATCATGCTGGGTCTGATGCTGCTGGGTCTGGCGTGGCTGGTCGTGAACTACATCGCCGGCCCGGCCATCCCGCTGATGGTCACCCTCGGCCCGTGGAATTACCTGATCGGGTTCGGCCTGTTCATCGTTGGTCTGTTGATGACGATGGGCTGGAAGTAA |
| Sequence | MPKSKINSPEENFDSSAAAGVDRRTPVKLNASGTPRWYIVIMLGLMLLGLAWLVVNYIAGPAIPLMVTLGPWNYLIGFGLFIVGLLMTMGWK |
| Source of smORF | Swiss-Prot |
| Function | Involved in cell division. {ECO:0000255|HAMAP-Rule:MF_00631}. |
| Pubmed ID | 18367281 |
| Domain | CDD:416303 |
| Functional Category | Others |
| Uniprot ID | B1VE23 |
| ORF Length (Amino Acid) | 92 |
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| Conservation Analysis |
No. of Species: 91
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 1739805 | 1740083 | - | NZ_LT906481.1 | Corynebacterium urealyticum |
| 2 | 35924 | 36199 | - | NZ_CP046883.1 | Corynebacterium anserum |
| 3 | 67063 | 67347 | - | NZ_CP006842.1 | Corynebacterium glyciniphilum AJ 3170 |
| 4 | 221580 | 221852 | + | NZ_LS483459.1 | Corynebacterium jeikeium |
| 5 | 22600 | 22872 | - | NC_021915.1 | Corynebacterium maris DSM 45190 |
| 6 | 137921 | 138196 | - | NZ_CP009251.1 | Corynebacterium stationis |
| 7 | 2665161 | 2665436 | + | NZ_LS483460.1 | Corynebacterium minutissimum |
| 8 | 2094647 | 2094925 | + | NZ_CP042429.1 | Corynebacterium nuruki S6-4 |
| 9 | 35836 | 36117 | - | NZ_CP008944.1 | Corynebacterium atypicum |
| 10 | 37854 | 38126 | - | NZ_CP039247.1 | Corynebacterium endometrii |
| 11 | 2087585 | 2087848 | + | NZ_CP069485.1 | Corynebacterium glucuronolyticum |
| 12 | 35570 | 35845 | - | NZ_CP009247.1 | Corynebacterium frankenforstense DSM 45800 |
| 13 | 37293 | 37565 | - | NZ_CP011311.1 | Corynebacterium camporealensis |
| 14 | 138362 | 138637 | - | NZ_LR698967.1 | Corynebacterium ammoniagenes |
| 15 | 45097 | 45366 | - | NZ_CP011542.1 | Corynebacterium mustelae |
| 16 | 1745951 | 1746220 | - | NZ_CP068168.1 | Corynebacterium amycolatum |
| 17 | 35121 | 35393 | - | NZ_CP011545.1 | Corynebacterium testudinoris |
| 18 | 20618 | 20887 | - | NZ_CP009248.1 | Corynebacterium sphenisci DSM 44792 |
| 19 | 75130 | 75399 | - | NZ_LR738855.1 | Corynebacterium rouxii |
| 20 | 43212 | 43481 | - | NZ_LN831026.1 | Corynebacterium diphtheriae |
| 21 | 28602 | 28868 | - | NZ_CP026947.1 | Corynebacterium yudongzhengii |
| 22 | 18537 | 18806 | - | NZ_CP006841.1 | Corynebacterium lactis RW2-5 |
| 23 | 42780 | 43043 | + | NZ_CP033896.1 | Corynebacterium choanae |
| 24 | 1524400 | 1524669 | - | NZ_LT906443.1 | Corynebacterium ulcerans |
| 25 | 886941 | 887216 | - | NZ_LS483464.1 | Corynebacterium renale |
| 26 | 25367 | 25633 | - | NZ_CP007790.1 | Corynebacterium marinum DSM 44953 |
| 27 | 22975 | 23241 | - | NZ_CP009249.1 | Corynebacterium phocae |
| 28 | 1525408 | 1525680 | + | NZ_CP014635.1 | Corynebacterium simulans |
| 29 | 29246 | 29515 | - | NC_017301.2 | Corynebacterium pseudotuberculosis C231 |
| 30 | 24154 | 24423 | - | NZ_CP033897.1 | Corynebacterium gerontici |
| 31 | 22766 | 23035 | - | NC_020302.1 | Corynebacterium halotolerans YIM 70093 = DSM 44683 |
| 32 | 64855 | 65124 | - | NC_021663.1 | Corynebacterium terpenotabidum Y-11 |
| 33 | 37737 | 38000 | - | NZ_CP011546.1 | Corynebacterium uterequi |
| 34 | 2052387 | 2052656 | + | NZ_CP032788.1 | Corynebacterium xerosis |
| 35 | 40697 | 40969 | - | NZ_CP009246.1 | Corynebacterium flavescens |
| 36 | 784253 | 784525 | + | NZ_CP038157.1 | Corynebacterium sanguinis |
| 37 | 39026 | 39292 | - | NZ_CP011541.1 | Corynebacterium epidermidicanis |
| 38 | 31248 | 31511 | - | NZ_CP009245.1 | Corynebacterium aquilae DSM 44791 |
| 39 | 29348 | 29617 | - | NZ_CP011312.1 | Corynebacterium kutscheri |
| 40 | 43523 | 43798 | - | NC_015673.1 | Corynebacterium resistens DSM 45100 |
| 41 | 48159 | 48425 | - | NZ_CP004353.1 | Corynebacterium vitaeruminis DSM 20294 |
| 42 | 140155 | 140424 | + | NZ_CP067012.1 | Corynebacterium kefirresidentii |
| 43 | 46077 | 46349 | - | NC_012704.1 | Corynebacterium kroppenstedtii DSM 44385 |
| 44 | 40739 | 41005 | - | NZ_CP006764.1 | Corynebacterium doosanense CAU 212 = DSM 45436 |
| 45 | 30901 | 31176 | - | NZ_CP019688.1 | Corynebacterium glaucum |
| 46 | 1305498 | 1305770 | - | NZ_CP068161.1 | Corynebacterium propinquum |
| 47 | 37738 | 38010 | - | NZ_AP017369.1 | Corynebacterium suranareeae |
| 48 | 26688 | 26960 | - | NZ_CP009220.1 | Corynebacterium deserti GIMN1.010 |
| 49 | 41469 | 41741 | - | NZ_CP026948.1 | Corynebacterium liangguodongii |
| 50 | 30427 | 30702 | - | NZ_CP010827.1 | Corynebacterium singulare |
| 51 | 2884222 | 2884488 | + | NZ_CP016793.1 | Lentzea guizhouensis |
| 52 | 45439 | 45711 | - | NC_020506.1 | Corynebacterium callunae DSM 20147 |
| 53 | 26779 | 27051 | - | NZ_CP015622.1 | Corynebacterium crudilactis |
| 54 | 22265 | 22528 | - | NC_022198.1 | Corynebacterium argentoratense DSM 44202 |
| 55 | 17105 | 17371 | - | NZ_CP023445.1 | Actinosynnema pretiosum |
| 56 | 17118 | 17384 | - | NC_013093.1 | Actinosynnema mirum DSM 43827 |
| 57 | 41254 | 41520 | - | NZ_CP015449.1 | Dietzia lutea |
| 58 | 32625 | 32897 | - | NC_004369.1 | Corynebacterium efficiens YS-314 |
| 59 | 31904 | 32170 | - | NZ_CP015453.1 | Dietzia psychralcaliphila |
| 60 | 29395 | 29670 | - | NC_012590.1 | Corynebacterium aurimucosum ATCC 700975 |
| 61 | 22144 | 22413 | - | NZ_CP012752.1 | Kibdelosporangium phytohabitans |
| 62 | 17664 | 17930 | - | NZ_CP034550.1 | Saccharothrix syringae |
| 63 | 124940 | 125212 | - | NZ_LT906467.1 | Corynebacterium imitans |
| 64 | 58400 | 58663 | - | NC_006361.1 | Nocardia farcinica IFM 10152 |
| 65 | 29122 | 29400 | - | NZ_CP009215.1 | Corynebacterium ureicelerivorans |
| 66 | 6480893 | 6481159 | + | NZ_CP031142.1 | Saccharopolyspora pogona |
| 67 | 2804105 | 2804371 | + | NZ_LS483468.1 | Rhodococcus coprophilus |
| 68 | 42547 | 42819 | - | NZ_CP015961.1 | Dietzia timorensis |
| 69 | 27612 | 27878 | - | NZ_CP045929.1 | Saccharopolyspora coralli |
| 70 | 23748 | 24014 | - | NZ_CP022521.1 | Actinoalloteichus hoggarensis |
| 71 | 1675525 | 1675791 | + | NZ_CP026746.1 | Nocardia cyriacigeorgica |
| 72 | 54265 | 54531 | - | NC_009142.1 | Saccharopolyspora erythraea NRRL 2338 |
| 73 | 21089 | 21355 | - | NZ_CP016076.1 | Actinoalloteichus fjordicus |
| 74 | 36893 | 37159 | - | NZ_CP016353.1 | Prauserella marina |
| 75 | 22921 | 23190 | - | NZ_CP035299.1 | Corynebacterium pelargi |
| 76 | 6240955 | 6241221 | + | NZ_CP015163.1 | Amycolatopsis albispora |
| 77 | 23093 | 23362 | - | NZ_CP033898.1 | Corynebacterium pseudopelargi |
| 78 | 28806 | 29072 | - | NC_021252.1 | Amycolatopsis keratiniphila |
| 79 | 6517854 | 6518117 | + | NZ_CP022088.2 | Nocardia brasiliensis |
| 80 | 6981801 | 6982067 | + | NZ_CP041695.1 | Nocardia otitidiscaviarum |
| 81 | 17307 | 17570 | - | NZ_CP018082.1 | Nocardia mangyaensis |
| 82 | 793183 | 793446 | - | NZ_LR134352.1 | Nocardia asteroides |
| 83 | 27733 | 27999 | - | NZ_CP008953.1 | Amycolatopsis japonica |
| 84 | 9467365 | 9467631 | + | NZ_CP016174.1 | Amycolatopsis orientalis |
| 85 | 25511 | 25804 | - | NC_014158.1 | Tsukamurella paurometabola DSM 20162 |
| 86 | 21645 | 21911 | - | NZ_AP017900.1 | Nocardia seriolae |
| 87 | 4396638 | 4396901 | - | NZ_CP048813.1 | Rhodococcus triatomae |
| 88 | 17290 | 17556 | - | NC_019673.1 | Saccharothrix espanaensis DSM 44229 |
| 89 | 1540581 | 1540850 | + | NZ_CP053564.1 | Pseudonocardia broussonetiae |
| 90 | 42225 | 42491 | - | NC_022116.1 | Amycolatopsis mediterranei RB |
| 91 | 23078 | 23344 | - | NZ_CP022752.1 | Actinopolyspora erythraea |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_LT906481.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF00160.23 | 0.75 | 68 | 1555.0 | opposite-strand | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD |
| 2 | PF01694.24 | 0.78 | 71 | 812 | opposite-strand | Rhomboid family |
| 3 | PF03793.21 | 0.81 | 74 | 123.0 | same-strand | PASTA domain |
| 4 | PF00069.27 | 0.81 | 74 | 2104 | same-strand | Protein kinase domain |
| 5 | PF07714.19 | 0.81 | 74 | 2000.0 | same-strand | Protein tyrosine and serine/threonine kinase |
| 6 | PF00905.24 | 0.71 | 65 | 3721 | same-strand | Penicillin binding protein transpeptidase domain |
| 7 | PF01098.21 | 0.66 | 60 | 5115.5 | same-strand | Cell cycle protein |
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