* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_002695.2
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF03595.19
|
1.0
|
2
|
1584
|
same-strand
|
Voltage-dependent anion channel
|
2
|
PF03848.16
|
1.0
|
2
|
994
|
same-strand
|
Tellurite resistance protein TehB
|
3
|
PF13649.8
|
1.0
|
2
|
994
|
same-strand
|
Methyltransferase domain
|
4
|
PF08241.14
|
1.0
|
2
|
994
|
same-strand
|
Methyltransferase domain
|
5
|
PF08242.14
|
1.0
|
2
|
994
|
same-strand
|
Methyltransferase domain
|
6
|
PF11769.10
|
1.0
|
2
|
22
|
same-strand
|
Protein of unknown function (DUF3313)
|
7
|
PF03594.15
|
1.0
|
2
|
-250
|
opposite-strand
|
Benzoate membrane transport protein
|
8
|
PF01381.24
|
1.0
|
2
|
1014
|
same-strand
|
Helix-turn-helix
|
9
|
PF13560.8
|
1.0
|
2
|
1014
|
same-strand
|
Helix-turn-helix domain
|
10
|
PF07883.13
|
1.0
|
2
|
1014
|
same-strand
|
Cupin domain
|
11
|
PF01136.21
|
1.0
|
2
|
1596
|
same-strand
|
Peptidase family U32
|
12
|
PF12392.10
|
1.0
|
2
|
1596
|
same-strand
|
Collagenase
|
13
|
PF07927.14
|
1.0
|
2
|
4128
|
same-strand
|
HicA toxin of bacterial toxin-antitoxin,
|
14
|
PF18836.3
|
1.0
|
2
|
2699.5
|
opposite-strand
|
YdcK Beta solenoid repeat
|
++ More..