* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_002695.2
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF00011.23
|
1.0
|
2
|
3222.5
|
same-strand
|
Hsp20/alpha crystallin family
|
2
|
PF07119.14
|
1.0
|
2
|
2322.0
|
opposite-strand
|
Protein of unknown function (DUF1375)
|
3
|
PF12566.10
|
1.0
|
2
|
1109.0
|
same-strand
|
Protein of unknown function (DUF3748)
|
4
|
PF08282.14
|
1.0
|
2
|
1206.0
|
same-strand
|
haloacid dehalogenase-like hydrolase
|
5
|
PF00702.28
|
1.0
|
2
|
1206.0
|
same-strand
|
haloacid dehalogenase-like hydrolase
|
++ More..