* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_002695.2
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF00707.24
|
1.0
|
2
|
4574
|
opposite-strand
|
Translation initiation factor IF-3, C-terminal domain
|
2
|
PF00587.27
|
1.0
|
2
|
2534
|
opposite-strand
|
tRNA synthetase class II core domain (G, H, P, S and T)
|
3
|
PF03129.22
|
1.0
|
2
|
2534
|
opposite-strand
|
Anticodon binding domain
|
4
|
PF07973.16
|
1.0
|
2
|
2534
|
opposite-strand
|
Threonyl and Alanyl tRNA synthetase second additional domain
|
5
|
PF02824.23
|
1.0
|
2
|
2534
|
opposite-strand
|
TGS domain
|
6
|
PF04338.14
|
1.0
|
2
|
64
|
opposite-strand
|
Protein of unknown function, DUF481
|
7
|
PF00294.26
|
1.0
|
2
|
1109
|
same-strand
|
pfkB family carbohydrate kinase
|
8
|
PF11080.10
|
1.0
|
2
|
2139
|
same-strand
|
Endoribonuclease GhoS
|
9
|
PF03881.16
|
1.0
|
2
|
2535
|
same-strand
|
Fructosamine kinase
|
10
|
PF01636.25
|
1.0
|
2
|
2535
|
same-strand
|
Phosphotransferase enzyme family
|
++ More..