Result : EXP00531
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | EXP00531 |
| NCBI Accession ID | CP008957.1 |
| Organism | Escherichia coli O157:H7 str. EDL933 |
| Left | 713429 |
| Right | 713626 |
| Strand | + |
| Nucleotide Sequence | ATGTTTGATTCACTGGCAAAAGCCGGAAAATATTTAGGTCAGGCGGCGAAGCTGATGATTGGTATGCCTGATTACGACAACTATGTCGAACATATGCGGGTTAACCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGACGCGCGCTACGGTGGAAAAGGCGGCGCGCGCTGCTGCTAA |
| Sequence | MFDSLAKAGKYLGQAAKLMIGMPDYDNYVEHMRVNHPDQTPMTYEEFFRERQDARYGGKGGARCC |
| Source of smORF | Ribo-seq |
| Function | The ORF matches to the profile of cl01082. Profile Description: Selenoprotein, putative. This family is named KCU-star because nearly all member proteins end with tripeptide lysine-cysteine-selenocysteine, followed immediately by a stop codon (represented by an asterisk, or star). Members occur in primarily in species of Helicobacter (although not Helicobacter pylori, in which selenocysteine incorporation capability has been lost) and Campylobacter. This small family belongs the larger YbdD/YjiX (DUF466) family described by Pfam model PF04328. |
| Pubmed ID | 26911138 |
| Domain | CDD:412734 |
| Functional Category | Conserved domain based functional assignment |
| Uniprot ID | P0ADD1 |
| ORF Length (Amino Acid) | 65 |
++ More..
| Conservation Analysis |
No. of Species: 310
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 3096877 | 3097074 | - | NZ_CP061527.1 | Shigella dysenteriae |
| 2 | 3667065 | 3667268 | + | NZ_CP061527.1 | Shigella dysenteriae |
| 3 | 1273534 | 1273731 | + | NZ_LR134340.1 | Escherichia marmotae |
| 4 | 571711 | 571914 | - | NZ_LR134340.1 | Escherichia marmotae |
| 5 | 1541111 | 1541308 | - | NZ_CP057657.1 | Escherichia fergusonii |
| 6 | 2181991 | 2182194 | + | NZ_CP057657.1 | Escherichia fergusonii |
| 7 | 535544 | 535741 | + | NC_004337.2 | Shigella flexneri 2a str. 301 |
| 8 | 4543075 | 4543278 | - | NC_004337.2 | Shigella flexneri 2a str. 301 |
| 9 | 632182 | 632379 | + | NC_000913.3 | Escherichia coli str. K-12 substr. MG1655 |
| 10 | 4588876 | 4589079 | - | NC_000913.3 | Escherichia coli str. K-12 substr. MG1655 |
| 11 | 605920 | 606117 | + | NZ_AP014857.1 | Escherichia albertii |
| 12 | 4606932 | 4607135 | - | NZ_AP014857.1 | Escherichia albertii |
| 13 | 713652 | 713849 | + | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
| 14 | 5446667 | 5446870 | - | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
| 15 | 300022 | 300219 | + | NZ_CP027107.1 | Cronobacter sakazakii |
| 16 | 4081140 | 4081343 | - | NZ_CP027107.1 | Cronobacter sakazakii |
| 17 | 1028665 | 1028862 | + | NZ_CP013940.1 | Cronobacter malonaticus LMG 23826 |
| 18 | 515851 | 516054 | - | NZ_CP013940.1 | Cronobacter malonaticus LMG 23826 |
| 19 | 2363186 | 2363383 | - | NC_009792.1 | Citrobacter koseri ATCC BAA-895 |
| 20 | 3210396 | 3210599 | + | NC_009792.1 | Citrobacter koseri ATCC BAA-895 |
| 21 | 2849020 | 2849217 | + | NZ_LT556085.1 | Citrobacter amalonaticus |
| 22 | 414652 | 414855 | + | NZ_LT556085.1 | Citrobacter amalonaticus |
| 23 | 3224681 | 3224878 | - | NZ_CP012266.1 | Cronobacter dublinensis subsp. dublinensis LMG 23823 |
| 24 | 3769173 | 3769376 | + | NZ_CP012266.1 | Cronobacter dublinensis subsp. dublinensis LMG 23823 |
| 25 | 3152844 | 3153041 | + | NZ_CP053416.1 | Salmonella bongori |
| 26 | 2541189 | 2541392 | - | NZ_CP053416.1 | Salmonella bongori |
| 27 | 3887330 | 3887527 | - | NZ_CP014007.2 | Kosakonia oryzae |
| 28 | 4633882 | 4634085 | + | NZ_CP014007.2 | Kosakonia oryzae |
| 29 | 3087848 | 3088045 | - | NZ_CP012257.1 | Cronobacter universalis NCTC 9529 |
| 30 | 3592094 | 3592297 | + | NZ_CP012257.1 | Cronobacter universalis NCTC 9529 |
| 31 | 3768413 | 3768610 | - | NZ_CP065838.1 | Klebsiella quasipneumoniae |
| 32 | 4553680 | 4553883 | + | NZ_CP065838.1 | Klebsiella quasipneumoniae |
| 33 | 3783193 | 3783390 | - | NZ_LR134475.1 | Klebsiella aerogenes |
| 34 | 4529562 | 4529765 | + | NZ_LR134475.1 | Klebsiella aerogenes |
| 35 | 3372003 | 3372200 | - | NZ_CP035129.1 | Kosakonia cowanii |
| 36 | 4012406 | 4012609 | + | NZ_CP035129.1 | Kosakonia cowanii |
| 37 | 1324780 | 1324977 | + | NZ_CP015113.1 | Kosakonia radicincitans |
| 38 | 453970 | 454173 | - | NZ_CP015113.1 | Kosakonia radicincitans |
| 39 | 3011406 | 3011603 | + | NZ_CP042941.1 | Atlantibacter hermannii |
| 40 | 663446 | 663643 | + | NC_003197.2 | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 |
| 41 | 4787285 | 4787488 | - | NC_003197.2 | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 |
| 42 | 3761489 | 3761686 | + | NZ_AP019007.1 | Enterobacter oligotrophicus |
| 43 | 3132429 | 3132632 | - | NZ_AP019007.1 | Enterobacter oligotrophicus |
| 44 | 1255052 | 1255249 | + | NZ_AP022508.1 | Enterobacter bugandensis |
| 45 | 613482 | 613685 | - | NZ_AP022508.1 | Enterobacter bugandensis |
| 46 | 1205561 | 1205758 | + | NZ_CP017184.1 | Enterobacter roggenkampii |
| 47 | 605162 | 605365 | - | NZ_CP017184.1 | Enterobacter roggenkampii |
| 48 | 1308875 | 1309072 | - | NZ_CP025034.2 | Enterobacter sp. SGAir0187 |
| 49 | 1913992 | 1914195 | + | NZ_CP025034.2 | Enterobacter sp. SGAir0187 |
| 50 | 4264373 | 4264570 | - | NZ_CP045205.1 | Citrobacter telavivensis |
| 51 | 1316354 | 1316557 | - | NZ_CP045205.1 | Citrobacter telavivensis |
| 52 | 1198979 | 1199176 | + | NC_015968.1 | Enterobacter soli |
| 53 | 561773 | 561976 | - | NC_015968.1 | Enterobacter soli |
| 54 | 2851272 | 2851469 | + | NZ_CP040428.1 | Jejubacter calystegiae |
| 55 | 1747426 | 1747623 | - | NZ_CP016337.1 | Kosakonia sacchari |
| 56 | 2401996 | 2402199 | + | NZ_CP016337.1 | Kosakonia sacchari |
| 57 | 1315581 | 1315778 | + | NZ_CP063425.1 | Kosakonia pseudosacchari |
| 58 | 671632 | 671835 | - | NZ_CP063425.1 | Kosakonia pseudosacchari |
| 59 | 1510021 | 1510218 | + | NC_016845.1 | Klebsiella pneumoniae subsp. pneumoniae HS11286 |
| 60 | 662538 | 662741 | - | NC_016845.1 | Klebsiella pneumoniae subsp. pneumoniae HS11286 |
| 61 | 4024584 | 4024781 | - | NZ_CP054254.1 | Klebsiella variicola |
| 62 | 4841703 | 4841906 | + | NZ_CP054254.1 | Klebsiella variicola |
| 63 | 439191 | 439388 | + | NZ_CP017279.1 | Enterobacter ludwigii |
| 64 | 3739770 | 3739973 | - | NZ_CP017279.1 | Enterobacter ludwigii |
| 65 | 2468422 | 2468619 | + | NZ_CP020388.1 | Pluralibacter gergoviae |
| 66 | 1274374 | 1274571 | + | NZ_CP009756.1 | Enterobacter cloacae |
| 67 | 637188 | 637391 | - | NZ_CP009756.1 | Enterobacter cloacae |
| 68 | 851045 | 851242 | + | NZ_CP012268.1 | Cronobacter muytjensii ATCC 51329 |
| 69 | 368423 | 368626 | - | NZ_CP012268.1 | Cronobacter muytjensii ATCC 51329 |
| 70 | 1682503 | 1682700 | - | NZ_CP045300.1 | Kosakonia arachidis |
| 71 | 2411960 | 2412163 | + | NZ_CP045300.1 | Kosakonia arachidis |
| 72 | 2275116 | 2275313 | - | NZ_CP045769.1 | Enterobacter cancerogenus |
| 73 | 2945035 | 2945238 | + | NZ_CP045769.1 | Enterobacter cancerogenus |
| 74 | 1251419 | 1251616 | + | NZ_CP027986.1 | Enterobacter sichuanensis |
| 75 | 592517 | 592720 | - | NZ_CP027986.1 | Enterobacter sichuanensis |
| 76 | 1447530 | 1447727 | + | NZ_CP043318.1 | Enterobacter chengduensis |
| 77 | 719967 | 720170 | - | NZ_CP043318.1 | Enterobacter chengduensis |
| 78 | 4338658 | 4338855 | - | NZ_CP051548.1 | Phytobacter diazotrophicus |
| 79 | 5202043 | 5202246 | + | NZ_CP051548.1 | Phytobacter diazotrophicus |
| 80 | 3093535 | 3093732 | - | NZ_CP011602.1 | Phytobacter ursingii |
| 81 | 3922047 | 3922250 | + | NZ_CP011602.1 | Phytobacter ursingii |
| 82 | 959198 | 959395 | - | NZ_CP044098.1 | Citrobacter portucalensis |
| 83 | 1673636 | 1673830 | + | NZ_CP044098.1 | Citrobacter portucalensis |
| 84 | 3418424 | 3418621 | - | NZ_LR134201.1 | Cedecea lapagei |
| 85 | 2486940 | 2487143 | + | NZ_LR134201.1 | Cedecea lapagei |
| 86 | 2013193 | 2013390 | - | NZ_CP038469.1 | Citrobacter tructae |
| 87 | 2730215 | 2730409 | + | NZ_CP038469.1 | Citrobacter tructae |
| 88 | 4157495 | 4157692 | + | NZ_CP033744.1 | Citrobacter freundii |
| 89 | 3382617 | 3382811 | - | NZ_CP033744.1 | Citrobacter freundii |
| 90 | 674141 | 674338 | + | NC_013716.1 | Citrobacter rodentium ICC168 |
| 91 | 5106217 | 5106420 | - | NC_013716.1 | Citrobacter rodentium ICC168 |
| 92 | 3323128 | 3323325 | - | NZ_CP045845.1 | Kluyvera intermedia |
| 93 | 4022769 | 4022972 | + | NZ_CP045845.1 | Kluyvera intermedia |
| 94 | 3548025 | 3548222 | - | NZ_CP013990.1 | Leclercia adecarboxylata |
| 95 | 4208099 | 4208302 | + | NZ_CP013990.1 | Leclercia adecarboxylata |
| 96 | 3263269 | 3263466 | - | NZ_CP054058.1 | Scandinavium goeteborgense |
| 97 | 3980458 | 3980661 | + | NZ_CP054058.1 | Scandinavium goeteborgense |
| 98 | 3999962 | 4000159 | - | NZ_CP046672.1 | Raoultella ornithinolytica |
| 99 | 4809821 | 4810024 | + | NZ_CP046672.1 | Raoultella ornithinolytica |
| 100 | 3322725 | 3322922 | - | NZ_AP023184.1 | Buttiauxella agrestis |
| 101 | 4408140 | 4408337 | - | NZ_CP060111.1 | Klebsiella michiganensis |
| 102 | 5302495 | 5302698 | + | NZ_CP060111.1 | Klebsiella michiganensis |
| 103 | 4265418 | 4265615 | - | NZ_CP036175.1 | Klebsiella huaxiensis |
| 104 | 5198517 | 5198720 | + | NZ_CP036175.1 | Klebsiella huaxiensis |
| 105 | 3151447 | 3151644 | - | NZ_CP012264.1 | Cronobacter condimenti 1330 |
| 106 | 3681751 | 3681954 | + | NZ_CP012264.1 | Cronobacter condimenti 1330 |
| 107 | 3828302 | 3828499 | - | NZ_CP041247.1 | Raoultella electrica |
| 108 | 4563345 | 4563548 | + | NZ_CP041247.1 | Raoultella electrica |
| 109 | 3219419 | 3219616 | + | NZ_CP026047.1 | Raoultella planticola |
| 110 | 2428821 | 2429024 | - | NZ_CP026047.1 | Raoultella planticola |
| 111 | 1358753 | 1358950 | + | NZ_CP012871.1 | [Enterobacter] lignolyticus |
| 112 | 647734 | 647937 | - | NZ_CP012871.1 | [Enterobacter] lignolyticus |
| 113 | 158495 | 158692 | + | NZ_CP023529.1 | Lelliottia amnigena |
| 114 | 4042185 | 4042388 | - | NZ_CP023529.1 | Lelliottia amnigena |
| 115 | 284681 | 284878 | - | NZ_CP007445.1 | Gilliamella apicola |
| 116 | 195047 | 195244 | - | NZ_CP040449.1 | Aeromonas simiae |
| 117 | 3762825 | 3763022 | - | NZ_CP023525.1 | Cedecea neteri |
| 118 | 2734202 | 2734405 | + | NZ_CP023525.1 | Cedecea neteri |
| 119 | 4136671 | 4136868 | - | NZ_CP050508.1 | Raoultella terrigena |
| 120 | 4911946 | 4912149 | + | NZ_CP050508.1 | Raoultella terrigena |
| 121 | 554134 | 554331 | + | NZ_CP006664.1 | Edwardsiella anguillarum ET080813 |
| 122 | 2763227 | 2763424 | - | NZ_CP023706.1 | Edwardsiella tarda |
| 123 | 1076178 | 1076375 | - | NZ_CP016043.1 | Edwardsiella hoshinae |
| 124 | 2683663 | 2683860 | + | NC_012779.2 | Edwardsiella ictaluri 93-146 |
| 125 | 1457043 | 1457240 | + | NC_017910.1 | Shimwellia blattae DSM 4481 = NBRC 105725 |
| 126 | 460959 | 461156 | + | NZ_LR134376.1 | Aeromonas encheleia |
| 127 | 3757501 | 3757698 | + | NZ_CP048796.1 | Providencia vermicola |
| 128 | 1142529 | 1142732 | + | NZ_CP048796.1 | Providencia vermicola |
| 129 | 2114889 | 2115086 | + | NZ_CP009056.1 | Frischella perrara |
| 130 | 3143361 | 3143558 | + | NZ_CP031123.2 | Providencia huaxiensis |
| 131 | 2740625 | 2740828 | - | NZ_CP031123.2 | Providencia huaxiensis |
| 132 | 557828 | 558031 | - | NZ_CP029185.2 | Limnobaculum parvum |
| 133 | 1444947 | 1445144 | - | NZ_CP029736.1 | Providencia rettgeri |
| 134 | 4023171 | 4023374 | - | NZ_CP029736.1 | Providencia rettgeri |
| 135 | 2476721 | 2476924 | - | NZ_CP006569.1 | Sodalis praecaptivus |
| 136 | 562797 | 563000 | - | NZ_CP034752.1 | Jinshanibacter zhutongyuii |
| 137 | 2423620 | 2423814 | + | NZ_CP034752.1 | Jinshanibacter zhutongyuii |
| 138 | 938493 | 938690 | + | NZ_CP071706.1 | Pseudomonas donghuensis |
| 139 | 5942034 | 5942231 | - | NZ_LS999205.1 | Pseudomonas protegens CHA0 |
| 140 | 4938038 | 4938235 | - | NZ_CP024159.1 | Pseudomonas mosselii |
| 141 | 1744777 | 1744977 | - | NZ_AP014724.1 | Sulfurospirillum cavolei |
| 142 | 3613813 | 3614010 | + | NZ_LS483422.1 | Providencia heimbachae |
| 143 | 1139837 | 1140040 | + | NZ_LS483422.1 | Providencia heimbachae |
| 144 | 1324556 | 1324756 | - | NZ_CP017111.1 | Sulfurospirillum halorespirans DSM 13726 |
| 145 | 801852 | 802049 | + | NZ_CP062158.2 | Pseudomonas lundensis |
| 146 | 836678 | 836875 | + | NC_008027.1 | Pseudomonas entomophila L48 |
| 147 | 1082157 | 1082354 | - | NZ_CP048810.1 | Pseudomonas bijieensis |
| 148 | 5121810 | 5122007 | + | NZ_CP048810.1 | Pseudomonas bijieensis |
| 149 | 63239 | 63436 | + | NZ_CP012676.1 | Pseudomonas versuta |
| 150 | 1395323 | 1395520 | + | NZ_CP049044.1 | Pseudomonas psychrophila |
| 151 | 4968431 | 4968628 | - | NZ_CP022562.1 | Pseudomonas monteilii |
| 152 | 5150704 | 5150901 | - | NZ_CP007039.1 | Pseudomonas cichorii JBC1 |
| 153 | 5995112 | 5995309 | - | NZ_CP051487.1 | Pseudomonas umsongensis |
| 154 | 2945272 | 2945469 | + | NZ_CP051487.1 | Pseudomonas umsongensis |
| 155 | 4043966 | 4044166 | - | NZ_CP051487.1 | Pseudomonas umsongensis |
| 156 | 4366106 | 4366303 | + | NZ_CP009533.1 | Pseudomonas rhizosphaerae |
| 157 | 166128 | 166331 | + | NZ_CP017482.1 | Pectobacterium polaris |
| 158 | 1107926 | 1108129 | + | NC_012912.1 | Dickeya chrysanthemi Ech1591 |
| 159 | 3541601 | 3541804 | - | NZ_CP025799.1 | Dickeya zeae |
| 160 | 4815883 | 4816080 | + | NZ_CP005960.1 | Pseudomonas mandelii JR-1 |
| 161 | 577460 | 577657 | - | NZ_CP005960.1 | Pseudomonas mandelii JR-1 |
| 162 | 962740 | 962940 | - | NZ_CP005960.1 | Pseudomonas mandelii JR-1 |
| 163 | 3042136 | 3042333 | + | NZ_CP035088.1 | Pseudomonas viciae |
| 164 | 5776863 | 5777060 | - | NZ_CP035088.1 | Pseudomonas viciae |
| 165 | 210776 | 210973 | + | NZ_CP047385.1 | Pandoraea fibrosis |
| 166 | 190914 | 191111 | + | NZ_CP014262.1 | Pseudomonas corrugata |
| 167 | 2648394 | 2648591 | - | NZ_CP014262.1 | Pseudomonas corrugata |
| 168 | 781983 | 782180 | + | NZ_CP067022.1 | Pseudomonas cannabina pv. alisalensis |
| 169 | 5143335 | 5143532 | - | NZ_CP042804.1 | Pseudomonas amygdali pv. tabaci str. ATCC 11528 |
| 170 | 946240 | 946443 | - | NZ_CP015137.1 | Dickeya solani IPO 2222 |
| 171 | 3730579 | 3730782 | - | NC_014500.1 | Dickeya dadantii 3937 |
| 172 | 5574816 | 5575013 | - | NZ_CP056030.1 | Pseudomonas eucalypticola |
| 173 | 2613489 | 2613686 | - | NZ_CP031146.1 | Pseudomonas plecoglossicida |
| 174 | 3687029 | 3687232 | - | NZ_CP065044.1 | Pectobacterium aroidearum |
| 175 | 700934 | 701131 | + | NZ_CP014870.1 | Pseudomonas silesiensis |
| 176 | 2511279 | 2511476 | + | NZ_CP014870.1 | Pseudomonas silesiensis |
| 177 | 2863734 | 2863934 | + | NZ_CP014870.1 | Pseudomonas silesiensis |
| 178 | 5834781 | 5834978 | - | NZ_CP034725.1 | Pseudomonas brassicacearum |
| 179 | 3176043 | 3176240 | + | NZ_CP034725.1 | Pseudomonas brassicacearum |
| 180 | 3442437 | 3442640 | - | NZ_CP042220.2 | Dickeya poaceiphila |
| 181 | 5892605 | 5892802 | + | NZ_CP009365.1 | Pseudomonas soli |
| 182 | 596460 | 596663 | + | NZ_CP015749.1 | Pectobacterium parmentieri |
| 183 | 312585 | 312788 | - | NZ_CP047495.1 | Pectobacterium brasiliense |
| 184 | 3514693 | 3514896 | - | NZ_CP051652.1 | Pectobacterium carotovorum |
| 185 | 1329966 | 1330169 | + | NZ_CP009125.1 | Pectobacterium atrosepticum |
| 186 | 3232694 | 3232897 | + | NZ_CP015750.1 | Pectobacterium wasabiae CFBP 3304 |
| 187 | 1358307 | 1358510 | + | NZ_CP038498.1 | Pectobacterium punjabense |
| 188 | 5073518 | 5073715 | - | NZ_CP068034.2 | Pseudomonas syringae |
| 189 | 5011659 | 5011856 | - | NZ_CP046621.1 | Pseudomonas alkylphenolica |
| 190 | 990720 | 990917 | + | NZ_CP070503.1 | Pseudomonas atacamensis |
| 191 | 5443284 | 5443481 | - | NZ_CP029608.1 | Pseudomonas kribbensis |
| 192 | 5808178 | 5808375 | - | NZ_CP014205.2 | Pseudomonas glycinae |
| 193 | 5643219 | 5643416 | - | NZ_CP062253.1 | Pseudomonas gozinkensis |
| 194 | 5664206 | 5664403 | - | NZ_CP062252.1 | Pseudomonas allokribbensis |
| 195 | 1046829 | 1047032 | + | NZ_CP034035.1 | Brenneria rubrifaciens |
| 196 | 3715002 | 3715205 | - | NZ_CP072455.1 | Xenorhabdus budapestensis |
| 197 | 5922779 | 5922976 | - | NZ_CP061079.1 | Pseudomonas chlororaphis |
| 198 | 1096376 | 1096579 | + | NC_012880.1 | Musicola paradisiaca Ech703 |
| 199 | 5240240 | 5240437 | - | NC_004578.1 | Pseudomonas syringae pv. tomato str. DC3000 |
| 200 | 2346305 | 2346499 | + | NZ_LS483470.1 | Leminorella richardii |
| 201 | 650889 | 651092 | - | NZ_LS483470.1 | Leminorella richardii |
| 202 | 1416419 | 1416622 | + | NZ_CP034938.1 | Pectobacterium odoriferum |
| 203 | 845415 | 845612 | + | NC_021505.1 | Pseudomonas putida NBRC 14164 |
| 204 | 2929265 | 2929468 | + | NZ_CP022579.1 | Oryzomicrobium terrae |
| 205 | 938051 | 938254 | + | NZ_LT615367.1 | Dickeya aquatica |
| 206 | 1449719 | 1449916 | - | NC_016043.1 | Taylorella asinigenitalis MCE3 |
| 207 | 3524698 | 3524901 | - | NZ_CP034036.1 | Brenneria nigrifluens DSM 30175 = ATCC 13028 |
| 208 | 2839736 | 2839939 | + | NZ_CP029822.1 | Entomomonas moraniae |
| 209 | 4167554 | 4167757 | + | NZ_CP060401.1 | Xenorhabdus nematophila |
| 210 | 300383 | 300586 | + | NZ_CP067059.1 | Rahnella aceris |
| 211 | 3517640 | 3517843 | + | NC_013892.1 | Xenorhabdus bovienii SS-2004 |
| 212 | 408846 | 409049 | - | NZ_CP015581.1 | Tatumella citrea |
| 213 | 5326616 | 5326813 | - | NZ_CP013481.2 | Pandoraea apista |
| 214 | 3281252 | 3281455 | + | NZ_CP023009.1 | Lonsdalea britannica |
| 215 | 185046 | 185243 | - | NZ_CP005961.1 | Pseudomonas mandelii JR-1 |
| 216 | 5142601 | 5142798 | - | NZ_CP054205.1 | Pseudomonas rhodesiae |
| 217 | 5249954 | 5250151 | - | NZ_CP023272.1 | Pseudomonas lurida |
| 218 | 5283802 | 5283999 | - | NZ_CP010896.1 | Pseudomonas simiae |
| 219 | 5656834 | 5657031 | - | NZ_CP027756.1 | Pseudomonas synxantha |
| 220 | 142129 | 142326 | + | NC_023018.2 | Pandoraea pnomenusa |
| 221 | 2547105 | 2547308 | - | NZ_CP011254.1 | Serratia fonticola |
| 222 | 6004681 | 6004878 | - | NZ_CP018420.1 | Pseudomonas veronii |
| 223 | 1535803 | 1536006 | + | NZ_CP048833.1 | Pseudomonas multiresinivorans |
| 224 | 5073820 | 5074017 | - | NZ_CP027723.1 | Pseudomonas orientalis |
| 225 | 625862 | 626059 | + | NZ_CP012400.2 | Pseudomonas yamanorum |
| 226 | 3253248 | 3253451 | - | NZ_FO704550.1 | Xenorhabdus doucetiae |
| 227 | 2874084 | 2874287 | - | NZ_CP014137.1 | Brenneria goodwinii |
| 228 | 3986718 | 3986921 | + | NZ_CP009460.1 | Dickeya fangzhongdai |
| 229 | 3779787 | 3779990 | - | NZ_CP031560.1 | Dickeya dianthicola |
| 230 | 3377612 | 3377815 | - | NZ_AP014862.1 | Pseudomonas furukawaii |
| 231 | 1452377 | 1452571 | - | NZ_LR134531.1 | Pragia fontium |
| 232 | 463835 | 464038 | - | NZ_LR134531.1 | Pragia fontium |
| 233 | 184122 | 184319 | + | NZ_CP010897.2 | Pandoraea vervacti |
| 234 | 161134 | 161331 | + | NZ_LT906435.1 | Pandoraea sputorum |
| 235 | 2033601 | 2033804 | + | NZ_CP065534.1 | Lonsdalea populi |
| 236 | 572340 | 572543 | - | NC_015567.1 | Serratia plymuthica AS9 |
| 237 | 1006616 | 1006819 | - | NZ_CP011835.1 | Azotobacter chroococcum |
| 238 | 131549 | 131746 | + | NZ_CP011253.3 | Pandoraea oxalativorans |
| 239 | 147679 | 147876 | + | NZ_CP011807.3 | Pandoraea faecigallinarum |
| 240 | 4509400 | 4509603 | + | NZ_CP071320.1 | Serratia ureilytica |
| 241 | 4990133 | 4990336 | - | NZ_CP016948.1 | Serratia surfactantfaciens |
| 242 | 655961 | 656164 | - | NZ_LT906479.1 | Serratia ficaria |
| 243 | 552766 | 552969 | - | NZ_CP038662.1 | Serratia nematodiphila |
| 244 | 525670 | 525873 | - | NZ_CP048784.1 | Serratia liquefaciens |
| 245 | 554344 | 554547 | - | NZ_LR134494.1 | Serratia quinivorans |
| 246 | 588585 | 588788 | + | NZ_CP014136.1 | Gibbsiella quercinecans |
| 247 | 568206 | 568409 | - | NC_010694.1 | Erwinia tasmaniensis Et1/99 |
| 248 | 4225947 | 4226150 | + | NZ_CP016176.1 | Xenorhabdus hominickii |
| 249 | 856234 | 856437 | + | NZ_CP043311.1 | Pseudomonas lalkuanensis |
| 250 | 2364593 | 2364796 | + | NZ_CP043311.1 | Pseudomonas lalkuanensis |
| 251 | 1204180 | 1204380 | + | NC_013512.1 | Sulfurospirillum deleyianum DSM 6946 |
| 252 | 5163536 | 5163739 | - | NC_002516.2 | Pseudomonas aeruginosa PAO1 |
| 253 | 4135448 | 4135651 | - | NC_012560.1 | Azotobacter vinelandii DJ |
| 254 | 2108504 | 2108707 | - | NZ_CP065640.1 | Serratia rubidaea |
| 255 | 5270840 | 5271034 | + | NZ_CP059560.1 | Aromatoleum petrolei |
| 256 | 1476909 | 1477106 | - | NZ_CP021060.1 | Taylorella equigenitalis |
| 257 | 174408 | 174617 | + | NZ_CP010310.2 | Pandoraea pulmonicola |
| 258 | 1668257 | 1668460 | - | NZ_CP045302.1 | Azotobacter salinestris |
| 259 | 1098748 | 1098951 | + | NZ_AP022642.1 | Pseudomonas otitidis |
| 260 | 1544801 | 1545004 | - | NZ_CP023536.1 | Providencia alcalifaciens |
| 261 | 1956199 | 1956402 | + | NZ_CP023536.1 | Providencia alcalifaciens |
| 262 | 5377068 | 5377271 | + | NZ_CP007044.2 | Chania multitudinisentens RB-25 |
| 263 | 3646735 | 3646932 | - | NZ_CP038034.1 | Achromobacter insolitus |
| 264 | 1184069 | 1184266 | + | NZ_CP053986.1 | Achromobacter denitrificans |
| 265 | 2650689 | 2650892 | - | NZ_FO704551.1 | Xenorhabdus poinarii G6 |
| 266 | 6089726 | 6089929 | - | NZ_CP014158.1 | Pseudomonas citronellolis |
| 267 | 115550 | 115756 | - | NZ_CP009831.1 | Burkholderia multivorans ATCC BAA-247 |
| 268 | 106147 | 106353 | + | NC_007511.1 | Burkholderia lata |
| 269 | 5313486 | 5313692 | - | NZ_CP047698.1 | Pseudomonas knackmussii |
| 270 | 2162767 | 2162973 | + | NZ_CP009793.1 | Burkholderia dolosa AU0158 |
| 271 | 193308 | 193505 | + | NZ_CP013480.3 | Pandoraea norimbergensis |
| 272 | 2965901 | 2966107 | - | NZ_CP013452.1 | Burkholderia cenocepacia |
| 273 | 1281458 | 1281664 | + | NZ_CP011504.1 | Burkholderia pyrrocinia |
| 274 | 2893738 | 2893944 | + | NZ_CP045236.1 | Burkholderia cepacia |
| 275 | 2950608 | 2950814 | - | NZ_CP013400.1 | Burkholderia seminalis |
| 276 | 3776617 | 3776823 | - | NZ_LT907988.1 | Orrella dioscoreae |
| 277 | 2455860 | 2456060 | + | NZ_CP019236.1 | Rhodoferax koreense |
| 278 | 4209990 | 4210187 | - | NZ_CP016440.1 | Bordetella pseudohinzii |
| 279 | 5804027 | 5804227 | - | NZ_CP046904.1 | Massilia flava |
| 280 | 1347097 | 1347294 | - | NZ_CP021395.1 | Bordetella hinzii |
| 281 | 2523824 | 2524021 | + | NZ_CP043046.1 | Pigmentiphaga aceris |
| 282 | 2460226 | 2460426 | - | NZ_CP028324.1 | Massilia armeniaca |
| 283 | 1337022 | 1337204 | - | NZ_CP049135.1 | Paraburkholderia tropica |
| 284 | 2869474 | 2869680 | + | NZ_CP008782.1 | Burkholderia pseudomallei |
| 285 | 761135 | 761341 | + | NZ_CP047349.1 | Proteus terrae subsp. cibarius |
| 286 | 178215 | 178421 | + | NC_010554.1 | Proteus mirabilis HI4320 |
| 287 | 588298 | 588501 | - | NC_013961.1 | Erwinia amylovora CFBP1430 |
| 288 | 2872219 | 2872425 | - | NZ_CP013403.1 | Burkholderia metallica |
| 289 | 3242931 | 3243137 | - | NZ_CP020738.1 | Paraburkholderia acidophila |
| 290 | 3651758 | 3651964 | - | NZ_CP002581.1 | Burkholderia plantarii |
| 291 | 3791488 | 3791682 | - | NZ_CP032519.1 | Cupriavidus oxalaticus |
| 292 | 2900067 | 2900273 | - | NZ_CP013461.1 | Burkholderia stagnalis |
| 293 | 2905507 | 2905713 | - | NZ_CP013416.1 | Burkholderia ubonensis |
| 294 | 6926951 | 6927151 | - | NZ_CP040017.1 | Massilia umbonata |
| 295 | 4815195 | 4815395 | + | NZ_CP036401.1 | Massilia albidiflava |
| 296 | 3997775 | 3997969 | - | NZ_CP039287.1 | Cupriavidus necator H16 |
| 297 | 3504623 | 3504820 | - | NZ_CP043146.1 | Bordetella holmesii |
| 298 | 2362059 | 2362265 | + | NZ_CP026364.1 | Proteus hauseri |
| 299 | 4429589 | 4429783 | - | NZ_CP062803.1 | Cupriavidus basilensis |
| 300 | 91119 | 91313 | + | NC_021294.1 | Caballeronia insecticola |
| 301 | 4100159 | 4100359 | + | NZ_HG322949.1 | Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628 |
| 302 | 309236 | 309418 | - | NZ_CP009556.1 | Burkholderia oklahomensis C6786 |
| 303 | 6028930 | 6029127 | - | NZ_CP019038.1 | Massilia putida |
| 304 | 2764443 | 2764625 | - | NC_007650.1 | Burkholderia thailandensis E264 |
| 305 | 2051077 | 2051277 | - | NZ_CP048832.1 | Janthinobacterium lividum |
| 306 | 422379 | 422573 | + | NZ_CP068285.1 | Ralstonia syzygii subsp. celebesensis |
| 307 | 2120894 | 2121088 | + | NZ_CP012943.1 | Ralstonia solanacearum |
| 308 | 2049199 | 2049405 | + | NZ_CP046910.1 | Paraburkholderia acidiphila |
| 309 | 3402133 | 3402306 | - | NZ_CP054626.1 | Cupriavidus gilardii |
| 310 | 230428 | 230625 | - | NZ_CP017754.1 | Cupriavidus malaysiensis |
| 311 | 630462 | 630656 | + | NZ_CP011451.1 | Nitrosomonas communis |
| 312 | 1115700 | 1115903 | - | NZ_CP035901.1 | Burkholderia glumae |
| 313 | 1004610 | 1004792 | - | NZ_CP026113.1 | Paraburkholderia terrae |
| 314 | 2495407 | 2495613 | + | NZ_CP021106.3 | Nitrosospira lacus |
| 315 | 5445470 | 5445670 | - | NZ_CP013236.1 | Collimonas pratensis |
| 316 | 5413449 | 5413649 | - | NZ_CP013232.1 | Collimonas fungivorans |
| 317 | 4587791 | 4587991 | - | NZ_CP013235.1 | Collimonas arenae |
| 318 | 1968494 | 1968688 | - | NZ_CP011257.1 | Ralstonia mannitolilytica |
| 319 | 7037587 | 7037808 | + | NZ_CP024608.1 | Massilia violaceinigra |
| 320 | 2132191 | 2132391 | - | NZ_CP023422.1 | Janthinobacterium svalbardensis |
| 321 | 5897852 | 5898052 | - | NZ_CP041185.1 | Janthinobacterium tructae |
| 322 | 1453465 | 1453665 | - | NC_007614.1 | Nitrosospira multiformis ATCC 25196 |
| 323 | 1076934 | 1077134 | + | NC_014315.1 | Nitrosococcus watsonii C-113 |
| 324 | 3883427 | 3883621 | - | NZ_CP016022.1 | Ralstonia insidiosa |
| 325 | 1094361 | 1094555 | - | NC_008825.1 | Methylibium petroleiphilum PM1 |
| 326 | 1772062 | 1772271 | + | NZ_CP060783.1 | Diaphorobacter aerolatus |
| 327 | 821508 | 821690 | + | NZ_CP024645.1 | Rhizobacter gummiphilus |
| 328 | 3770125 | 3770334 | + | NZ_CP024201.1 | Caulobacter mirabilis |
| 329 | 170110 | 170310 | - | NZ_CP012371.1 | Nitrosospira briensis C-128 |
| 330 | 401988 | 402170 | - | NZ_CP012371.1 | Nitrosospira briensis C-128 |
| 331 | 3262015 | 3262239 | + | NZ_LS483377.1 | Stenotrophomonas maltophilia |
| 332 | 3402932 | 3403093 | + | NZ_CP037883.1 | Stenotrophomonas indicatrix |
| 333 | 1054192 | 1054374 | + | NC_010625.1 | Paraburkholderia phymatum STM815 |
| 334 | 1624714 | 1624875 | - | NZ_CP021455.1 | Comamonas serinivorans |
| 335 | 1446396 | 1446614 | + | NZ_CP027666.1 | Ottowia oryzae |
| 336 | 2391735 | 2391896 | + | NZ_CP046570.1 | Xanthomonas albilineans |
| 337 | 2696940 | 2697125 | - | NC_007908.1 | Rhodoferax ferrireducens T118 |
| 338 | 887784 | 887960 | + | NZ_CP042218.1 | Luteimonas granuli |
| 339 | 2227170 | 2227355 | + | NZ_CP037993.1 | Herbaspirillum huttiense |
| 340 | 76557 | 76718 | - | NZ_CP022111.1 | Nitrospirillum amazonense CBAmc |
| 341 | 3758005 | 3758166 | + | NZ_CP060731.1 | Pseudoxanthomonas mexicana |
| 342 | 10141671 | 10141871 | + | NZ_CP012159.1 | Chondromyces crocatus |
| 343 | 1350821 | 1351009 | - | NZ_LT853882.1 | Xanthomonas fragariae |
| 344 | 92431 | 92619 | - | NZ_CP016878.1 | Xanthomonas hortorum |
| 345 | 4855404 | 4855628 | + | NZ_CP043476.1 | Xanthomonas hyacinthi |
| 346 | 4683498 | 4683695 | - | NC_008752.1 | Acidovorax citrulli AAC00-1 |
| 347 | 4693999 | 4694196 | - | NC_015138.1 | Acidovorax avenae subsp. avenae ATCC 19860 |
| 348 | 528492 | 528674 | - | NC_010627.1 | Paraburkholderia phymatum STM815 |
| 349 | 3122725 | 3122919 | + | NZ_CP046603.1 | Lysobacter soli |
| 350 | 117765 | 117932 | - | NC_014664.1 | Rhodomicrobium vannielii ATCC 17100 |
| 351 | 2755387 | 2755548 | + | NZ_CP023406.1 | Luteimonas chenhongjianii |
| 352 | 1294367 | 1294555 | - | NZ_CP007810.1 | Xanthomonas oryzae pv. oryzicola |
| 353 | 128690 | 128890 | - | NZ_CP071517.1 | Lysobacter arenosi |
| 354 | 2128596 | 2128781 | + | NZ_CP013737.1 | Herbaspirillum rubrisubalbicans M1 |
| 355 | 3220796 | 3220984 | + | NZ_CP028127.1 | Xanthomonas vasicola pv. vasculorum |
| 356 | 488618 | 488782 | + | NZ_CP022745.1 | Sphingobium xenophagum |
| 357 | 124730 | 124912 | - | NZ_CP015960.1 | Paraburkholderia caribensis |
| 358 | 714047 | 714262 | + | NZ_LN832562.1 | Paracoccus aminovorans |
| 359 | 1664279 | 1664440 | - | NZ_CP058243.1 | Xanthomonas campestris pv. raphani |
| 360 | 770587 | 770772 | - | NC_014006.1 | Sphingobium japonicum UT26S |
| 361 | 1325623 | 1325784 | - | NZ_CP012900.1 | Stenotrophomonas acidaminiphila |
| 362 | 3487155 | 3487331 | + | NZ_CP053923.1 | Defluviicoccus vanus |
| 363 | 9174638 | 9174796 | + | NZ_CP012109.1 | Myxococcus hansupus |
| 364 | 2148915 | 2149088 | - | NZ_CP020538.1 | Sphingobium herbicidovorans |
| 365 | 3299255 | 3299440 | - | NZ_CP060035.1 | Sphingobium fuliginis |
| 366 | 1943481 | 1943666 | + | NZ_AP017655.1 | Sphingobium cloacae |
| 367 | 2388578 | 2388763 | + | NC_014313.1 | Hyphomicrobium denitrificans ATCC 51888 |
| 368 | 1207985 | 1208143 | - | NZ_CP035704.1 | Pseudolysobacter antarcticus |
| 369 | 3404775 | 3404957 | - | NZ_CP035765.1 | Sphingomonas paucimobilis |
| 370 | 322595 | 322792 | + | NC_017584.1 | Rhodospirillum rubrum F11 |
| 371 | 2621108 | 2621311 | - | NC_004757.1 | Nitrosomonas europaea ATCC 19718 |
| 372 | 847362 | 847556 | - | NC_020541.1 | Rhodanobacter denitrificans |
| 373 | 849381 | 849539 | - | NC_020541.1 | Rhodanobacter denitrificans |
| 374 | 3480437 | 3480598 | + | NZ_CP064030.1 | Dyella caseinilytica |
| 375 | 3668370 | 3668528 | + | NZ_CP041046.1 | Luteibacter pinisoli |
| 376 | 2342469 | 2342627 | + | NZ_CP014841.1 | Dyella thiooxydans |
| 377 | 633925 | 634083 | + | NZ_CP017480.1 | Luteibacter rhizovicinus DSM 16549 |
| 378 | 7374507 | 7374665 | - | NC_017030.1 | Corallococcus coralloides DSM 2259 |
| 379 | 588502 | 588687 | - | NZ_CP034179.1 | Caenibius tardaugens NBRC 16725 |
| 380 | 1474297 | 1474467 | + | NC_011666.1 | Methylocella silvestris BL2 |
| 381 | 1252607 | 1252765 | - | NZ_CP022163.1 | Melittangium boletus DSM 14713 |
| 382 | 8403959 | 8404162 | - | NZ_CP022203.1 | Corallococcus macrosporus DSM 14697 |
| 383 | 941190 | 941348 | - | NZ_AP018560.1 | Aerosticca soli |
| 384 | 1785422 | 1785580 | - | NZ_CP023465.1 | Lysobacter capsici |
| 385 | 940853 | 941032 | + | NZ_CP015438.1 | Anoxybacillus amylolyticus |
| 386 | 4026871 | 4027029 | + | NZ_CP011131.1 | Lysobacter gummosus |
| 387 | 1359609 | 1359827 | - | NZ_CP044331.1 | Methylocystis parvus |
| 388 | 2081524 | 2081706 | - | NZ_CP031222.1 | Aquirhabdus parva |
| 389 | 4947538 | 4947756 | - | NZ_CP029553.1 | Methylobacterium terrae |
| 390 | 1912452 | 1912610 | - | NZ_CP011129.1 | Lysobacter antibioticus |
| 391 | 4563836 | 4564009 | + | NZ_CP007128.1 | Gemmatirosa kalamazoonesis |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP061527.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF02554.16 | 0.99 | 307 | 56 | same-strand | Carbon starvation protein CstA |
| 2 | PF13722.8 | 0.99 | 306 | 56 | same-strand | 5TM C-terminal transporter carbon starvation CstA |
++ More..