* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_003197.2
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF00912.24
|
1.0
|
6
|
876.0
|
same-strand
|
Transglycosylase
|
2
|
PF17092.7
|
1.0
|
6
|
876.0
|
same-strand
|
Penicillin-binding protein OB-like domain
|
3
|
PF00293.30
|
1.0
|
6
|
216.5
|
opposite-strand
|
NUDIX domain
|
4
|
PF07095.13
|
1.0
|
6
|
35.0
|
same-strand
|
Intracellular growth attenuator protein IgaA
|
5
|
PF13419.8
|
1.0
|
6
|
2235.5
|
same-strand
|
Haloacid dehalogenase-like hydrolase
|
6
|
PF01479.27
|
1.0
|
6
|
2915.0
|
same-strand
|
S4 domain
|
7
|
PF01430.21
|
1.0
|
6
|
3340.5
|
same-strand
|
Hsp33 protein
|
8
|
PF13687.8
|
0.83
|
5
|
4315
|
opposite-strand
|
Domain of unknown function (DUF4153)
|
++ More..