* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_003197.2
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF06779.16
|
1.0
|
2
|
3020.0
|
same-strand
|
Uncharacterised MFS-type transporter YbfB
|
2
|
PF07690.18
|
1.0
|
2
|
1582.0
|
same-strand
|
Major Facilitator Superfamily
|
3
|
PF04286.14
|
1.0
|
2
|
1529.5
|
same-strand
|
Protein of unknown function (DUF445)
|
4
|
PF00171.24
|
1.0
|
2
|
1187.5
|
opposite-strand
|
Aldehyde dehydrogenase family
|
5
|
PF06568.13
|
1.0
|
2
|
2760.0
|
opposite-strand
|
Domain of unknown function (DUF1127)
|
6
|
PF08845.12
|
1.0
|
2
|
3922.0
|
same-strand
|
Toxin SymE, type I toxin-antitoxin system
|
++ More..