* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_003197.2
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF17425.4
|
1.0
|
2
|
2727.0
|
opposite-strand
|
Arylsulfotransferase Ig-like domain
|
2
|
PF01323.22
|
1.0
|
2
|
1618.5
|
opposite-strand
|
DSBA-like thioredoxin domain
|
3
|
PF13462.8
|
1.0
|
2
|
1618.5
|
opposite-strand
|
Thioredoxin
|
4
|
PF02600.18
|
1.0
|
2
|
926.5
|
opposite-strand
|
Disulfide bond formation protein DsbB
|
5
|
PF00926.21
|
1.0
|
2
|
138.5
|
same-strand
|
3,4-dihydroxy-2-butanone 4-phosphate synthase
|
6
|
PF04380.15
|
1.0
|
2
|
45.5
|
opposite-strand
|
Membrane fusogenic activity
|
7
|
PF08971.13
|
1.0
|
2
|
400.0
|
same-strand
|
Glycogen synthesis protein
|
8
|
PF07290.13
|
1.0
|
2
|
868.0
|
opposite-strand
|
Protein of unknown function (DUF1449)
|
9
|
PF15975.7
|
1.0
|
2
|
1514.0
|
opposite-strand
|
Flotillin
|
10
|
PF00294.26
|
1.0
|
2
|
3448.0
|
same-strand
|
pfkB family carbohydrate kinase
|
11
|
PF01467.28
|
1.0
|
2
|
3448.0
|
same-strand
|
Cytidylyltransferase-like
|
++ More..