* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_011916.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF11775.10
|
1.0
|
2
|
2561.0
|
same-strand
|
Cobalamin biosynthesis protein CobT VWA domain
|
2
|
PF06213.14
|
1.0
|
2
|
2561.0
|
same-strand
|
Cobalamin biosynthesis protein CobT
|
3
|
PF07043.15
|
1.0
|
2
|
2275.0
|
opposite-strand
|
Protein of unknown function (DUF1328)
|
4
|
PF11288.10
|
1.0
|
2
|
1027.0
|
same-strand
|
Protein of unknown function (DUF3089)
|
++ More..