* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_011916.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF01112.20
|
1.0
|
2
|
5801.0
|
same-strand
|
Asparaginase
|
2
|
PF03606.17
|
1.0
|
2
|
3075.0
|
same-strand
|
C4-dicarboxylate anaerobic carrier
|
3
|
PF00593.26
|
1.0
|
2
|
202
|
same-strand
|
TonB dependent receptor
|
4
|
PF07715.17
|
1.0
|
2
|
202
|
same-strand
|
TonB-dependent Receptor Plug Domain
|
++ More..