* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_011916.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF06572.14
|
0.67
|
2
|
4023.5
|
same-strand
|
Protein of unknown function (DUF1131)
|
2
|
PF00881.26
|
1.0
|
3
|
3319
|
same-strand
|
Nitroreductase family
|
3
|
PF08712.13
|
1.0
|
3
|
2677
|
same-strand
|
Scaffold protein Nfu/NifU N terminal
|
4
|
PF01106.19
|
1.0
|
3
|
2677
|
same-strand
|
NifU-like domain
|
5
|
PF00579.27
|
1.0
|
3
|
79
|
same-strand
|
tRNA synthetases class I (W and Y)
|
6
|
PF03023.16
|
1.0
|
3
|
42
|
same-strand
|
Lipid II flippase MurJ
|
7
|
PF14667.8
|
1.0
|
3
|
42
|
same-strand
|
Polysaccharide biosynthesis C-terminal domain
|
++ More..