* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP026100.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF02774.20
|
1.0
|
4
|
99.5
|
same-strand
|
Semialdehyde dehydrogenase, dimerisation domain
|
2
|
PF01118.26
|
1.0
|
4
|
99.5
|
same-strand
|
Semialdehyde dehydrogenase, NAD binding domain
|
3
|
PF13409.8
|
0.75
|
3
|
3114
|
same-strand
|
Glutathione S-transferase, N-terminal domain
|
4
|
PF02798.22
|
0.75
|
3
|
3114
|
same-strand
|
Glutathione S-transferase, N-terminal domain
|
++ More..