* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_011916.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF01715.19
|
1.0
|
4
|
878.5
|
same-strand
|
IPP transferase
|
2
|
PF02464.19
|
1.0
|
4
|
187.0
|
same-strand
|
Competence-damaged protein
|
3
|
PF02776.20
|
1.0
|
4
|
107.5
|
same-strand
|
Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
|
4
|
PF02775.23
|
1.0
|
4
|
107.5
|
same-strand
|
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
|
5
|
PF00205.24
|
1.0
|
4
|
107.5
|
same-strand
|
Thiamine pyrophosphate enzyme, central domain
|
6
|
PF10369.11
|
1.0
|
4
|
1955.0
|
same-strand
|
Small subunit of acetolactate synthase
|
7
|
PF01842.27
|
1.0
|
4
|
1955.0
|
same-strand
|
ACT domain
|
8
|
PF13710.8
|
1.0
|
4
|
1955.0
|
same-strand
|
ACT domain
|
9
|
PF13291.8
|
1.0
|
4
|
1955.0
|
same-strand
|
ACT domain
|
++ More..