* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_011916.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF03358.17
|
1.0
|
3
|
2700
|
opposite-strand
|
NADPH-dependent FMN reductase
|
2
|
PF09335.13
|
1.0
|
3
|
210
|
same-strand
|
SNARE associated Golgi protein
|
3
|
PF00682.21
|
1.0
|
3
|
88
|
same-strand
|
HMGL-like
|
4
|
PF08502.12
|
1.0
|
3
|
88
|
same-strand
|
LeuA allosteric (dimerisation) domain
|
5
|
PF00892.22
|
1.0
|
3
|
2345
|
same-strand
|
EamA-like transporter family
|
6
|
PF06723.15
|
1.0
|
3
|
3602
|
same-strand
|
MreB/Mbl protein
|
7
|
PF04085.16
|
0.67
|
2
|
4404.5
|
same-strand
|
rod shape-determining protein MreC
|
++ More..