* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_002695.2
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF02541.18
|
1.0
|
4
|
2363
|
opposite-strand
|
Ppx/GppA phosphatase family
|
2
|
PF05231.16
|
1.0
|
4
|
76
|
same-strand
|
MASE1
|
3
|
PF00563.22
|
1.0
|
4
|
76
|
same-strand
|
EAL domain
|
4
|
PF11119.10
|
0.75
|
3
|
256.0
|
opposite-strand
|
Protein of unknown function (DUF2633)
|
5
|
PF05433.17
|
0.75
|
3
|
743.0
|
opposite-strand
|
Glycine zipper 2TM domain
|
6
|
PF13488.8
|
0.75
|
3
|
743.0
|
opposite-strand
|
Glycine zipper
|
7
|
PF13441.8
|
0.75
|
3
|
743.0
|
opposite-strand
|
YMGG-like Gly-zipper
|
8
|
PF17358.4
|
0.75
|
3
|
1274.0
|
opposite-strand
|
Family of unknown function (DUF5384)
|
9
|
PF00958.24
|
0.75
|
3
|
1907.0
|
same-strand
|
GMP synthase C terminal domain
|
10
|
PF00117.30
|
0.75
|
3
|
1907.0
|
same-strand
|
Glutamine amidotransferase class-I
|
++ More..