* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_002695.2
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF00654.22
|
0.71
|
5
|
4567.5
|
opposite-strand
|
Voltage gated chloride channel
|
2
|
PF10697.11
|
0.71
|
5
|
1307.5
|
opposite-strand
|
Protein of unknown function (DUF2502)
|
3
|
PF01566.20
|
1.0
|
7
|
-19.0
|
same-strand
|
Natural resistance-associated macrophage protein
|
4
|
PF07662.15
|
1.0
|
7
|
272.5
|
opposite-strand
|
Na+ dependent nucleoside transporter C-terminus
|
5
|
PF01773.22
|
1.0
|
7
|
272.5
|
opposite-strand
|
Na+ dependent nucleoside transporter N-terminus
|
6
|
PF07670.16
|
1.0
|
7
|
272.5
|
opposite-strand
|
Nucleoside recognition
|
7
|
PF05231.16
|
0.86
|
6
|
1528
|
same-strand
|
MASE1
|
8
|
PF00563.22
|
0.86
|
6
|
1528
|
same-strand
|
EAL domain
|
9
|
PF07037.13
|
0.86
|
6
|
4708
|
opposite-strand
|
Putative transcription regulator (DUF1323)
|
++ More..