Protein Information |
Information Type | Description |
---|---|
Protein name | UPF0235 protein TGRD_618 |
NCBI Accession ID | AP009510.1 |
Organism | Endomicrobium trichonymphae |
Left | 906647 |
Right | 906910 |
Strand | - |
Nucleotide Sequence | ATGATTATTAAAGTCAGAGTGATACCTAACTCAAAAAGAAATGAGGTCGTAAGCAGAGTGGGTTCTATTTTAAGGGTAAAAATCACGGCACCTGCGATTGAGGGCAGGGCAAATGAAGAGCTATGCGATTTTTTATCAGATTTTTTTGACGTAAAAAGATCGATGATTTTTCTGAGAAAAGGCGAAAGAGGCAGAGAAAAAACTATTGAAGTGTTGGGACGTTTGGAAGAAGAACTTAATGAAGTTTTGGATACGATACCGTAA |
Sequence | MIIKVRVIPNSKRNEVVSRVGSILRVKITAPAIEGRANEELCDFLSDFFDVKRSMIFLRKGERGREKTIEVLGRLEEELNEVLDTIP |
Source of smORF | Swiss-Prot |
Function | The ORF matches to the profile of cl00811. Profile Description: Uncharacterized ACR, YggU family COG1872. hypothetical protein; Validated |
Pubmed ID | 18391199 |
Domain | CDD:412584 |
Functional Category | Others |
Uniprot ID | B1GYK8 |
ORF Length (Amino Acid) | 87 |
Conservation Analysis |
Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
---|---|---|---|---|---|
1 | 210039 | 210302 | + | NZ_CP009498.1 | Endomicrobium proavitum |
2 | 867040 | 867303 | + | NC_010644.1 | Elusimicrobium minutum Pei191 |
Neighborhood Conservation Analysis |
Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
---|---|---|---|---|---|---|
1 | PF01168.22 | 1.0 | 2 | 442.0 | same-strand | Alanine racemase, N-terminal domain |