* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_LR134340.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF04363.14
|
1.0
|
5
|
66.0
|
same-strand
|
Protein of unknown function (DUF496)
|
2
|
PF13515.8
|
0.8
|
4
|
56
|
same-strand
|
Fusaric acid resistance protein-like
|
3
|
PF06445.17
|
0.6
|
3
|
1314.5
|
same-strand
|
GyrI-like small molecule binding domain
|
4
|
PF14526.8
|
0.6
|
3
|
1314.5
|
same-strand
|
Integron-associated effector binding protein
|
5
|
PF00768.22
|
0.8
|
4
|
1909
|
same-strand
|
D-alanyl-D-alanine carboxypeptidase
|
6
|
PF07943.15
|
0.8
|
4
|
1909
|
same-strand
|
Penicillin-binding protein 5, C-terminal domain
|
7
|
PF13354.8
|
0.8
|
4
|
1909
|
same-strand
|
Beta-lactamase enzyme family
|
8
|
PF08411.12
|
0.8
|
4
|
3280
|
opposite-strand
|
Exonuclease C-terminal
|
9
|
PF00929.26
|
0.8
|
4
|
3280
|
opposite-strand
|
Exonuclease
|
++ More..