* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_002695.2
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF04216.14
|
1.0
|
6
|
4619
|
same-strand
|
Protein involved in formate dehydrogenase formation
|
2
|
PF01292.22
|
1.0
|
6
|
3987
|
same-strand
|
Prokaryotic cytochrome b561
|
3
|
PF13247.8
|
1.0
|
6
|
3088
|
same-strand
|
4Fe-4S dicluster domain
|
4
|
PF09163.13
|
1.0
|
6
|
3088
|
same-strand
|
Formate dehydrogenase N, transmembrane
|
5
|
PF12838.9
|
1.0
|
6
|
3088
|
same-strand
|
4Fe-4S dicluster domain
|
6
|
PF13187.8
|
1.0
|
6
|
3088
|
same-strand
|
4Fe-4S dicluster domain
|
7
|
PF13237.8
|
1.0
|
6
|
3088
|
same-strand
|
4Fe-4S dicluster domain
|
8
|
PF12837.9
|
1.0
|
6
|
3088
|
same-strand
|
4Fe-4S binding domain
|
9
|
PF14697.8
|
1.0
|
6
|
3088
|
same-strand
|
4Fe-4S dicluster domain
|
10
|
PF01568.23
|
1.0
|
6
|
661
|
same-strand
|
Molydopterin dinucleotide binding domain
|
11
|
PF04879.18
|
1.0
|
6
|
25
|
same-strand
|
Molybdopterin oxidoreductase Fe4S4 domain
|
12
|
PF02634.17
|
1.0
|
6
|
77
|
opposite-strand
|
FdhD/NarQ family
|
13
|
PF12889.9
|
0.67
|
4
|
1064
|
opposite-strand
|
Protein of unknown function (DUF3829)
|
++ More..