* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_000913.3
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF00083.26
|
1.0
|
2
|
4887
|
same-strand
|
Sugar (and other) transporter
|
2
|
PF07690.18
|
1.0
|
2
|
4887
|
same-strand
|
Major Facilitator Superfamily
|
3
|
PF13561.8
|
1.0
|
2
|
3811
|
same-strand
|
Enoyl-(Acyl carrier protein) reductase
|
4
|
PF00106.27
|
1.0
|
2
|
3811
|
same-strand
|
short chain dehydrogenase
|
5
|
PF04962.14
|
1.0
|
2
|
2945
|
same-strand
|
KduI/IolB family
|
6
|
PF00108.25
|
1.0
|
2
|
1477
|
same-strand
|
Thiolase, N-terminal domain
|
7
|
PF02803.20
|
1.0
|
2
|
1477
|
same-strand
|
Thiolase, C-terminal domain
|
++ More..