* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_002695.2
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF00581.22
|
1.0
|
3
|
1446.0
|
opposite-strand
|
Rhodanese-like domain
|
2
|
PF01066.23
|
1.0
|
3
|
817.0
|
same-strand
|
CDP-alcohol phosphatidyltransferase
|
3
|
PF00293.30
|
1.0
|
3
|
323.0
|
opposite-strand
|
NUDIX domain
|
4
|
PF14815.8
|
1.0
|
3
|
323.0
|
opposite-strand
|
NUDIX domain
|
5
|
PF07383.14
|
1.0
|
3
|
85.0
|
same-strand
|
Protein of unknown function (DUF1496)
|
6
|
PF00208.23
|
1.0
|
3
|
110.0
|
opposite-strand
|
Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
|
7
|
PF02812.20
|
1.0
|
3
|
110.0
|
opposite-strand
|
Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
|
8
|
PF06889.13
|
1.0
|
3
|
1570.0
|
same-strand
|
Protein of unknown function (DUF1266)
|
9
|
PF01131.22
|
0.67
|
2
|
2738
|
same-strand
|
DNA topoisomerase
|
10
|
PF01751.24
|
0.67
|
2
|
2738
|
same-strand
|
Toprim domain
|
++ More..