* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_002695.2
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF03618.16
|
0.75
|
3
|
3739.0
|
opposite-strand
|
Kinase/pyrophosphorylase
|
2
|
PF00793.22
|
1.0
|
4
|
2536
|
opposite-strand
|
DAHP synthetase I family
|
3
|
PF10636.11
|
1.0
|
4
|
2213
|
opposite-strand
|
Hemin uptake protein hemP
|
4
|
PF02696.16
|
0.75
|
3
|
773.0
|
same-strand
|
Protein adenylyltransferase SelO
|
5
|
PF00563.22
|
1.0
|
4
|
-3
|
same-strand
|
EAL domain
|
6
|
PF00877.21
|
1.0
|
4
|
146
|
same-strand
|
NlpC/P60 family
|
7
|
PF00005.29
|
1.0
|
4
|
688
|
same-strand
|
ABC transporter
|
8
|
PF13191.8
|
0.75
|
3
|
688.0
|
same-strand
|
AAA ATPase domain
|
9
|
PF00255.21
|
1.0
|
4
|
1437
|
same-strand
|
Glutathione peroxidase
|
10
|
PF01032.20
|
1.0
|
4
|
2051
|
same-strand
|
FecCD transport family
|
11
|
PF00216.23
|
1.0
|
4
|
3132
|
same-strand
|
Bacterial DNA-binding protein
|
++ More..