* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_000913.3
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF12084.10
|
1.0
|
2
|
4852.5
|
same-strand
|
Protein of unknown function (DUF3561)
|
2
|
PF01583.22
|
1.0
|
2
|
4197.5
|
same-strand
|
Adenylylsulphate kinase
|
3
|
PF13671.8
|
1.0
|
2
|
4197.5
|
same-strand
|
AAA domain
|
4
|
PF00009.29
|
1.0
|
2
|
2770.5
|
same-strand
|
Elongation factor Tu GTP binding domain
|
5
|
PF03144.27
|
1.0
|
2
|
2770.5
|
same-strand
|
Elongation factor Tu domain 2
|
6
|
PF01507.21
|
1.0
|
2
|
1860.5
|
same-strand
|
Phosphoadenosine phosphosulfate reductase family
|
7
|
PF04389.19
|
1.0
|
2
|
571.0
|
opposite-strand
|
Peptidase family M28
|
8
|
PF09707.12
|
1.0
|
2
|
66.0
|
same-strand
|
CRISPR-associated protein (Cas Cas2CT1978)
|
9
|
PF08798.13
|
1.0
|
2
|
1285.0
|
same-strand
|
CRISPR associated protein
|
++ More..