Protein Information |
Information Type | Description |
---|---|
Protein name | Sec-independent protein translocase protein TatA |
NCBI Accession ID | CU468230.2 |
Organism | Acinetobacter baumannii (strain SDF) |
Left | 2800931 |
Right | 2801149 |
Strand | + |
Nucleotide Sequence | ATGGCTGGTTTATCTATTTGGCATGTCGTTATTTTCGCAATTGTCGTTATTTTATTGTTCGGTACATCTAAGCTAAAAAATATCGGTAAAGATGTAGGCGGTGCAGTAAGAGATTTTAAAAAGTCAGTTCGTGAAGAAGACGAAGCTGCATCTTTAAATAGCCCTCGTACAATTGATGCACAAGCTAAAACATCTGAAAGCACATCAGTGAAAAGCTAA |
Sequence | MAGLSIWHVVIFAIVVILLFGTSKLKNIGKDVGGAVRDFKKSVREEDEAASLNSPRTIDAQAKTSESTSVKS |
Source of smORF | Swiss-Prot |
Function | Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. {ECO:0000255|HAMAP-Rule:MF_00236}. |
Pubmed ID | 18350144 |
Domain | CDD:294511 |
Functional Category | Others |
Uniprot ID | B0VL58 |
ORF Length (Amino Acid) | 72 |
Conservation Analysis |
Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
---|---|---|---|---|---|
1 | 3434459 | 3434677 | + | NZ_CP015121.1 | Acinetobacter baumannii |
2 | 1533736 | 1533954 | + | NZ_CP040105.1 | Acinetobacter nosocomialis M2 |
3 | 3556332 | 3556550 | + | NZ_CP065820.1 | Acinetobacter seifertii |
4 | 3457517 | 3457735 | + | NZ_CP053391.1 | Acinetobacter lactucae |
5 | 3642311 | 3642529 | + | NC_014259.1 | Acinetobacter oleivorans DR1 |
6 | 1426683 | 1426901 | + | NZ_CP070518.1 | Acinetobacter calcoaceticus |
7 | 3627061 | 3627279 | - | NC_016603.1 | Acinetobacter pittii PHEA-2 |
8 | 507071 | 507286 | - | NZ_CP024632.1 | Acinetobacter junii |
9 | 3595366 | 3595581 | - | NZ_CP041970.1 | Acinetobacter dispersus |
10 | 465947 | 466165 | - | NZ_CP030880.1 | Acinetobacter haemolyticus |
11 | 1584013 | 1584231 | - | NZ_CP044483.1 | Acinetobacter schindleri |
12 | 2973894 | 2974112 | + | NZ_CP035934.2 | Acinetobacter cumulans |
13 | 3098036 | 3098254 | + | NZ_CP032134.1 | Acinetobacter chinensis |
14 | 403585 | 403803 | + | NZ_CP012808.1 | Acinetobacter equi |
15 | 160433 | 160657 | + | NZ_CP071766.1 | Acinetobacter towneri |
16 | 445367 | 445585 | - | NZ_CP045650.1 | Acinetobacter wanghuae |
17 | 2872170 | 2872394 | + | NZ_CP049916.1 | Acinetobacter lanii |
18 | 2931738 | 2931959 | + | NZ_CP029397.2 | Acinetobacter defluvii |
19 | 569797 | 570021 | - | NZ_AP014630.1 | Acinetobacter guillouiae |
20 | 1721532 | 1721756 | + | NZ_AP014630.1 | Acinetobacter guillouiae |
21 | 595172 | 595387 | - | NZ_CP049801.1 | Acinetobacter shaoyimingii |
22 | 509893 | 510114 | - | NC_005966.1 | Acinetobacter baylyi ADP1 |
23 | 1877068 | 1877283 | - | NZ_CP009238.1 | Basilea psittacipulmonis DSM 24701 |
24 | 195364 | 195582 | - | NZ_CP031222.1 | Aquirhabdus parva |
25 | 1483820 | 1484035 | - | NZ_CP047165.1 | Pelistega ratti |
Neighborhood Conservation Analysis |
Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
---|---|---|---|---|---|---|
1 | PF07021.14 | 0.71 | 17 | 2715 | same-strand | Methionine biosynthesis protein MetW |
2 | PF08241.14 | 0.71 | 17 | 2715 | same-strand | Methyltransferase domain |
3 | PF13489.8 | 0.71 | 17 | 2715 | same-strand | Methyltransferase domain |
4 | PF13649.8 | 0.71 | 17 | 2715 | same-strand | Methyltransferase domain |
5 | PF08242.14 | 0.71 | 17 | 2715 | same-strand | Methyltransferase domain |
6 | PF08238.14 | 0.79 | 19 | 2137 | same-strand | Sel1 repeat |
7 | PF01725.18 | 0.83 | 20 | 1165.0 | same-strand | Ham1 family |
8 | PF02416.18 | 0.83 | 20 | 13.0 | same-strand | mttA/Hcf106 family |
9 | PF00902.20 | 1.0 | 24 | 450 | same-strand | Sec-independent protein translocase protein (TatC) |
10 | PF05742.14 | 0.79 | 19 | 3673 | opposite-strand | Transport and Golgi organisation 2 |