* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_002695.2
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF00291.27
|
1.0
|
4
|
3065
|
same-strand
|
Pyridoxal-phosphate dependent enzyme
|
2
|
PF14821.8
|
1.0
|
4
|
3065
|
same-strand
|
Threonine synthase N terminus
|
3
|
PF03883.16
|
1.0
|
4
|
1626
|
opposite-strand
|
Peroxide stress protein YaaA
|
4
|
PF01235.19
|
0.75
|
3
|
126.0
|
opposite-strand
|
Sodium:alanine symporter family
|
5
|
PF00923.21
|
1.0
|
4
|
97
|
same-strand
|
Transaldolase/Fructose-6-phosphate aldolase
|
6
|
PF00994.26
|
1.0
|
4
|
1165
|
same-strand
|
Probable molybdopterin binding domain
|
7
|
PF01184.21
|
1.0
|
4
|
1787
|
opposite-strand
|
GPR1/FUN34/yaaH family
|
8
|
PF03981.14
|
0.75
|
3
|
2502.0
|
opposite-strand
|
Ubiquinol-cytochrome C chaperone
|
9
|
PF13099.8
|
0.75
|
3
|
2502.0
|
opposite-strand
|
Domain of unknown function (DUF3944)
|
10
|
PF10807.10
|
0.75
|
3
|
3241.0
|
opposite-strand
|
Protein of unknown function (DUF2541)
|
++ More..