* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_002695.2
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF02754.18
|
1.0
|
2
|
2134
|
same-strand
|
Cysteine-rich domain
|
2
|
PF02589.17
|
1.0
|
2
|
352.0
|
same-strand
|
LUD domain
|
3
|
PF13183.8
|
1.0
|
2
|
696
|
same-strand
|
4Fe-4S dicluster domain
|
4
|
PF11870.10
|
1.0
|
2
|
696
|
same-strand
|
Domain of unknown function (DUF3390)
|
5
|
PF13237.8
|
1.0
|
2
|
696
|
same-strand
|
4Fe-4S dicluster domain
|
6
|
PF13534.8
|
1.0
|
2
|
696
|
same-strand
|
4Fe-4S dicluster domain
|
7
|
PF13187.8
|
1.0
|
2
|
696
|
same-strand
|
4Fe-4S dicluster domain
|
8
|
PF12838.9
|
1.0
|
2
|
696
|
same-strand
|
4Fe-4S dicluster domain
|
9
|
PF20130.1
|
1.0
|
2
|
194
|
opposite-strand
|
Family of unknown function (DUF6520)
|
++ More..