* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_002695.2
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF13662.8
|
0.67
|
4
|
4931
|
same-strand
|
Toprim domain
|
2
|
PF02132.17
|
0.67
|
4
|
4931
|
same-strand
|
RecR protein
|
3
|
PF01751.24
|
0.67
|
4
|
4931
|
same-strand
|
Toprim domain
|
4
|
PF00183.20
|
0.83
|
5
|
2933.0
|
same-strand
|
Hsp90 protein
|
5
|
PF02518.28
|
0.83
|
5
|
2933.0
|
same-strand
|
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
|
6
|
PF13589.8
|
0.83
|
5
|
2933.0
|
same-strand
|
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
|
7
|
PF00406.24
|
0.83
|
5
|
2095.0
|
same-strand
|
Adenylate kinase
|
8
|
PF13207.8
|
0.83
|
5
|
2095.0
|
same-strand
|
AAA domain
|
9
|
PF05191.16
|
0.83
|
5
|
2095.0
|
same-strand
|
Adenylate kinase, active site lid
|
10
|
PF00762.21
|
0.83
|
5
|
1001.0
|
same-strand
|
Ferrochelatase
|
11
|
PF07859.15
|
0.67
|
4
|
45
|
opposite-strand
|
alpha/beta hydrolase fold
|
12
|
PF00999.23
|
0.83
|
5
|
1446.0
|
opposite-strand
|
Sodium/hydrogen exchanger family
|
13
|
PF02254.20
|
0.83
|
5
|
1446.0
|
opposite-strand
|
TrkA-N domain
|
14
|
PF02872.20
|
0.67
|
4
|
4798
|
same-strand
|
5'-nucleotidase, C-terminal domain
|
15
|
PF00149.30
|
0.67
|
4
|
4798
|
same-strand
|
Calcineurin-like phosphoesterase
|
++ More..