* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_002695.2
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF03733.15
|
1.0
|
3
|
3914.0
|
opposite-strand
|
Inner membrane component domain
|
2
|
PF12462.10
|
1.0
|
3
|
1737.0
|
same-strand
|
DNA helicase IV / RNA helicase N terminal
|
3
|
PF00580.23
|
1.0
|
3
|
1737.0
|
same-strand
|
UvrD/REP helicase N-terminal domain
|
4
|
PF13245.8
|
1.0
|
3
|
1737.0
|
same-strand
|
AAA domain
|
5
|
PF02142.24
|
1.0
|
3
|
1247.0
|
opposite-strand
|
MGS-like domain
|
6
|
PF09829.11
|
1.0
|
3
|
489.0
|
opposite-strand
|
Uncharacterized protein conserved in bacteria (DUF2057)
|
7
|
PF13380.8
|
1.0
|
3
|
-38.0
|
same-strand
|
CoA binding domain
|
8
|
PF02629.21
|
1.0
|
3
|
-38.0
|
same-strand
|
CoA binding domain
|
9
|
PF08755.13
|
1.0
|
3
|
104.0
|
opposite-strand
|
Hemimethylated DNA-binding protein YccV like
|
10
|
PF10672.11
|
1.0
|
3
|
479
|
opposite-strand
|
S-adenosylmethionine-dependent methyltransferase
|
11
|
PF17785.3
|
1.0
|
3
|
479.0
|
opposite-strand
|
PUA-like domain
|
12
|
PF00708.20
|
1.0
|
3
|
1764.0
|
same-strand
|
Acylphosphatase
|
13
|
PF04358.15
|
1.0
|
3
|
2039.0
|
opposite-strand
|
DsrC like protein
|
14
|
PF01027.22
|
0.67
|
2
|
2459
|
opposite-strand
|
Inhibitor of apoptosis-promoting Bax1
|
++ More..