* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_002695.2
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF03795.16
|
0.6
|
3
|
846.0
|
opposite-strand
|
YCII-related domain
|
2
|
PF16031.7
|
0.8
|
4
|
-56
|
same-strand
|
TonB polyproline region
|
3
|
PF03544.16
|
0.8
|
4
|
-56
|
same-strand
|
Gram-negative bacterial TonB protein C-terminal
|
4
|
PF03061.24
|
0.8
|
4
|
81
|
opposite-strand
|
Thioesterase superfamily
|
5
|
PF04279.17
|
0.6
|
3
|
584.0
|
opposite-strand
|
Intracellular septation protein A
|
6
|
PF06790.13
|
0.6
|
3
|
1153.0
|
opposite-strand
|
Uncharacterised protein family (UPF0259)
|
7
|
PF03922.16
|
0.6
|
3
|
2253.0
|
same-strand
|
OmpW family
|
8
|
PF13505.8
|
0.6
|
3
|
2253.0
|
same-strand
|
Outer membrane protein beta-barrel domain
|
++ More..