* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_LN831039.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF02882.21
|
1.0
|
2
|
1127.5
|
opposite-strand
|
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
|
2
|
PF00763.25
|
1.0
|
2
|
1127.5
|
opposite-strand
|
Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
|
3
|
PF00440.25
|
1.0
|
2
|
103.5
|
opposite-strand
|
Bacterial regulatory proteins, tetR family
|
4
|
PF01494.21
|
1.0
|
2
|
722.0
|
opposite-strand
|
FAD binding domain
|
5
|
PF08241.14
|
1.0
|
2
|
2271.0
|
same-strand
|
Methyltransferase domain
|
6
|
PF13649.8
|
1.0
|
2
|
2270
|
same-strand
|
Methyltransferase domain
|
7
|
PF08242.14
|
1.0
|
2
|
2271.0
|
same-strand
|
Methyltransferase domain
|
8
|
PF00561.22
|
1.0
|
2
|
3005.0
|
same-strand
|
alpha/beta hydrolase fold
|
9
|
PF01053.22
|
1.0
|
2
|
4167.5
|
same-strand
|
Cys/Met metabolism PLP-dependent enzyme
|
++ More..