* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_LN831039.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF01416.22
|
1.0
|
2
|
3057.5
|
opposite-strand
|
tRNA pseudouridine synthase
|
2
|
PF01083.24
|
1.0
|
2
|
1692.5
|
same-strand
|
Cutinase
|
3
|
PF00892.22
|
1.0
|
2
|
-162.0
|
same-strand
|
EamA-like transporter family
|
4
|
PF11706.10
|
1.0
|
2
|
42.5
|
opposite-strand
|
CGNR zinc finger
|
5
|
PF07336.13
|
1.0
|
2
|
42.5
|
opposite-strand
|
Putative stress-induced transcription regulator
|
6
|
PF05108.15
|
1.0
|
2
|
928.5
|
opposite-strand
|
Type VII secretion system ESX-1, transport TM domain B
|
7
|
PF00082.24
|
1.0
|
2
|
2239.5
|
same-strand
|
Subtilase family
|
8
|
PF08817.12
|
1.0
|
2
|
3554.0
|
same-strand
|
WXG100 protein secretion system (Wss), protein YukD
|
++ More..