ProsmORF-pred
Result : B0SMB9
Protein Information
Information Type Description
Protein name Phosphoribosyl-ATP pyrophosphatase (PRA-PH) (EC 3.6.1.31)
NCBI Accession ID CP000786.1
Organism Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris)
Left 971855
Right 972133
Strand +
Nucleotide Sequence ATGGAATTTTTATTAAAATTAGAAGATTTACTCCGCAAACGAAAAGAGGAATTACCCGAAAAATCCTACACAGCGGAATTATTCCGAGATGGGGTAGACCGAATCCTAAAAAAAATTGGGGAAGAAGCGGGGGAAGTGATCATCGCCGCAAAAAATCCAAATGAAAAAGAACTCATCCATGAAATTGCAGATTTGATTTTCCATTTAGAAGTGTTAATGGTCGAAAAAGGAATTAGTTTAACTACCATCGCAAAAGAATTAGAAAAAAGACATAGTTAA
Sequence MEFLLKLEDLLRKRKEELPEKSYTAELFRDGVDRILKKIGEEAGEVIIAAKNPNEKELIHEIADLIFHLEVLMVEKGISLTTIAKELEKRHS
Source of smORF Swiss-Prot
Function The ORF matches to the profile of cl16941. Profile Description: Nucleoside Triphosphate Pyrophosphohydrolase (EC 3.6.1.8) MazG-like domain superfamily. This family of short proteins are distantly related to the MazG enzyme. This suggests that these proteins are enzymes that catalyze a related reaction.
Pubmed ID 18270594
Domain CDD:418386
Functional Category Others
Uniprot ID B0SMB9
ORF Length (Amino Acid) 92
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Conservation Analysis
Conservation Analysis
No. of Species: 201
Sr.No. Left Position Right Position Strand NCBI Accession id Species Name
1 13999 14277 + NZ_CP020413.2 Leptospira interrogans serovar Copenhageni
2 3263602 3263880 + NZ_CP033614.1 Leptospira kmetyi
3 943145 943423 + NZ_CP015217.1 Leptospira tipperaryensis
4 3327262 3327540 + NZ_CP040840.1 Leptospira weilii
5 577355 577633 + NZ_CP030142.1 Leptospira mayottensis
6 559478 559756 - NZ_CP026671.1 Leptospira borgpetersenii serovar Ceylonica
7 497105 497383 + NC_017464.1 Ignavibacterium album JCM 16511
8 730387 730617 + NZ_AP017312.1 Aneurinibacillus soli
9 2967368 2967628 - NC_017668.1 Halobacillus halophilus DSM 2266
10 3221223 3221456 - NC_018178.1 Melioribacter roseus P3M-2
11 1825764 1826057 - NC_018664.1 Gottschalkia acidurici 9a
12 831606 831851 - NZ_CP069440.1 Phocaeicola coprophilus
13 1078740 1078985 + NC_015164.1 Phocaeicola salanitronis DSM 18170
14 1025447 1025674 + NC_014926.1 Thermovibrio ammonificans HB-1
15 631541 631819 + NC_014614.1 Acetoanaerobium sticklandii
16 2920538 2920843 + NZ_CP017704.1 Peribacillus simplex NBRC 15720 = DSM 1321
17 848693 848980 + NC_014633.1 Ilyobacter polytropus DSM 2926
18 2627546 2627791 - NZ_CP015401.2 Bacteroides caecimuris
19 1494352 1494579 + NC_011978.1 Thermotoga neapolitana DSM 4359
20 1720258 1720485 + NC_013642.1 Thermotoga naphthophila RKU-10
21 1713479 1713706 + NC_009486.1 Thermotoga petrophila RKU-1
22 4539173 4539430 - NC_016627.1 Acetivibrio clariflavus DSM 19732
23 2357976 2358245 - NZ_CP019870.1 Clostridioides difficile
24 2079471 2079725 - NZ_CP030926.1 Peribacillus butanolivorans
25 639085 639381 + NZ_CP014223.1 Anaerotignum propionicum DSM 1682
26 1308627 1308920 - NC_013192.1 Leptotrichia buccalis C-1013-b
27 3253282 3253518 + NZ_CP068053.1 Peribacillus psychrosaccharolyticus
28 2460311 2460595 + NZ_CP011058.1 Paenibacillus beijingensis
29 856564 856794 - NZ_CP029256.1 Christensenella minuta
30 204691 204996 + NZ_CP009687.1 Clostridium aceticum
31 966834 967103 + NC_007503.1 Carboxydothermus hydrogenoformans Z-2901
32 1750503 1750835 + NZ_CP028842.1 Clostridium botulinum
33 473584 473838 + NZ_CP016020.1 Bacillus weihaiensis
34 848171 848437 - NZ_CP034248.1 Paenibacillus lentus
35 685365 685682 - NZ_LR134483.1 Listeria grayi
36 1113057 1113350 - NZ_AP019829.2 Leptotrichia wadei
37 1250529 1250846 + NZ_CP032416.1 Clostridium fermenticellae
38 1767573 1767818 + NZ_CP011663.1 Clostridium sporogenes
39 2657421 2657663 - NC_020134.1 Thermoclostridium stercorarium subsp. stercorarium DSM 8532
40 4803614 4803844 - NZ_CP024035.1 Priestia aryabhattai
41 562784 563095 - NZ_LT906444.1 Listeria welshimeri
42 500236 500535 + NZ_CP012024.1 Bacillus smithii
43 1754752 1755075 - NZ_CP018180.1 Liquorilactobacillus nagelii
44 204544 204822 + NC_017672.3 Paenibacillus mucilaginosus K02
45 1762830 1763057 + NC_023151.1 Thermotoga maritima MSB8
46 368331 368651 + NZ_CP017713.1 Loigolactobacillus coryniformis subsp. coryniformis KCTC 3167 = DSM 20001
47 751920 752201 + NZ_CP026520.1 Paenibacillus chitinolyticus
48 1783026 1783274 + NC_016641.1 Paenibacillus terrae HPL-003
49 5454496 5454771 - NZ_CP020028.1 Paenibacillus kribbensis
50 1383159 1383491 - NC_014334.2 Lacticaseibacillus paracasei
51 3366493 3366732 - NZ_CP015378.1 Fictibacillus phosphorivorans
52 1114854 1115144 + NZ_CP034437.1 Paenibacillus albus
53 4068374 4068637 - NZ_CP013652.1 Paenibacillus naphthalenovorans
54 1064423 1064716 + NZ_AP019827.1 Leptotrichia shahii
55 2574052 2574339 + NZ_CP048649.1 Aminipila butyrica
56 22544 22789 + NZ_CP068564.1 Keratinibaculum paraultunense
57 3318207 3318485 - NZ_CP048286.1 Paenibacillus rhizovicinus
58 3325707 3325943 - NC_013791.2 Alkalihalobacillus pseudofirmus OF4
59 2619799 2620077 + NC_016894.1 Acetobacterium woodii DSM 1030
60 2517484 2517774 + NZ_CP041305.1 Cytobacillus ciccensis
61 2652662 2652949 + NZ_CP011388.1 Paenibacillus swuensis
62 3979573 3979809 - NZ_LT603683.1 Bacillus glycinifermentans
63 172743 173018 + NZ_CP034346.1 Paenibacillus lutimineralis
64 2487136 2487363 - NC_014654.1 Halanaerobium hydrogeniformans
65 3975662 3975979 + NC_016048.1 Oscillibacter valericigenes Sjm18-20
66 3032369 3032656 - NZ_CP016809.1 Paenibacillus ihbetae
67 1405656 1405883 - NZ_CP007452.1 Peptoclostridium acidaminophilum DSM 3953
68 5043522 5043809 - NZ_AP019308.1 Paenibacillus baekrokdamisoli
69 176309 176629 - NZ_CP018796.1 Lentilactobacillus parabuchneri
70 2995265 2995519 - NZ_CP036170.1 [Clostridium] scindens ATCC 35704
71 2816324 2816548 - NZ_CP045875.1 Heliorestis convoluta
72 1430203 1430514 + NZ_CP020772.1 Halobacillus mangrovi
73 185926 186258 + NC_008593.1 Clostridium novyi NT
74 1593948 1594250 - NZ_AP024085.1 Faecalibacillus intestinalis
75 2486178 2486465 + NZ_CP045298.1 Paenibacillus brasilensis
76 1078800 1079039 - NZ_LT635479.1 Lachnoclostridium phocaeense
77 481802 482092 + NZ_CP048209.1 Paenibacillus lycopersici
78 484842 485135 + NZ_CP016502.1 Acetivibrio thermocellus DSM 2360
79 1150256 1150504 + NZ_CP026363.1 Brevibacillus agri
80 5516882 5517148 + NZ_CP017269.1 Geosporobacter ferrireducens
81 3387993 3388250 - NC_010001.1 Lachnoclostridium phytofermentans ISDg
82 579371 579655 - NC_004193.1 Oceanobacillus iheyensis HTE831
83 305357 305677 - NZ_CP029971.1 Lentilactobacillus kefiri
84 2393179 2393466 - NZ_CP023704.1 Caldibacillus thermoamylovorans
85 1364276 1364608 + NZ_CP019323.1 Companilactobacillus allii
86 3533707 3533949 - NZ_CP022121.1 Dehalobacterium formicoaceticum
87 1770663 1770980 - NZ_CP009170.1 Thermoanaerobacter kivui
88 3731217 3731513 - NC_019897.1 Thermobacillus composti KWC4
89 1227619 1227903 - NZ_CP034413.2 Dysosmobacter welbionis
90 63464 63703 + NZ_LT990039.1 Massilistercora timonensis
91 2564482 2564754 - NZ_CP009416.1 Jeotgalibacillus malaysiensis
92 1616432 1616734 + NC_014136.1 Leuconostoc kimchii IMSNU 11154
93 2064932 2065219 + NZ_LR027880.1 Roseburia intestinalis L1-82
94 1565540 1565836 - NZ_CP025286.1 Ethanoligenens harbinense YUAN-3
95 2835751 2836071 + NZ_CP011102.1 Listeria weihenstephanensis
96 1338468 1338785 + NC_011837.1 Clostridium kluyveri NBRC 12016
97 2992648 2992974 - NZ_CP030280.1 Blautia argi
98 516382 516696 - NZ_CP042374.1 Leuconostoc carnosum
99 1566698 1567012 - NC_022795.1 Pseudothermotoga hypogea DSM 11164 = NBRC 106472
100 2135549 2135815 + NC_014376.1 [Clostridium] saccharolyticum WM1
101 2356281 2356574 + NZ_CP013862.1 Lentibacillus amyloliquefaciens
102 1082495 1082800 + NC_015687.1 Clostridium acetobutylicum DSM 1731
103 3622011 3622277 - NZ_CP045295.1 Paenibacillus cellulositrophicus
104 3455071 3455361 - NC_022571.1 Clostridium saccharobutylicum DSM 13864
105 160550 160837 + NZ_CP004078.1 Paenibacillus sabinae T27
106 3352658 3352915 - NZ_AP023367.1 Anaerocolumna cellulosilytica
107 7216509 7216757 + NZ_CP021780.1 Paenibacillus donghaensis
108 2074740 2075006 + NZ_CP048429.1 Paenibacillus jilunlii
109 97096 97338 + NZ_LR130778.1 Petrocella atlantisensis
110 1686847 1687137 + NC_020291.1 Clostridium saccharoperbutylacetonicum N1-4(HMT)
111 1244566 1244877 + NZ_CP047121.1 Lentilactobacillus hilgardii
112 701476 701745 + NC_015172.1 Syntrophobotulus glycolicus DSM 8271
113 578148 578459 - NZ_CP009577.1 Listeria ivanovii subsp. ivanovii
114 787103 787396 + NC_020995.1 Enterococcus casseliflavus EC20
115 2995349 2995573 - NC_010337.2 Heliomicrobium modesticaldum Ice1
116 2120259 2120549 - NZ_CP016786.1 Clostridium isatidis
117 4105054 4105323 - NZ_CP021850.1 Pseudoclostridium thermosuccinogenes
118 1737980 1738207 - NZ_CP017705.1 Brevibacillus laterosporus DSM 25
119 204562 204849 + NZ_CP009286.1 Paenibacillus stellifer
120 164655 164909 + NZ_CP009428.1 Paenibacillus odorifer
121 3637482 3637739 + NZ_CP048000.1 Anaerocolumna sedimenticola
122 499568 499879 - NC_013891.1 Listeria seeligeri serovar 1/2b str. SLCC3954
123 2031715 2031981 + NZ_CP068595.1 Paenibacillus sonchi
124 162097 162384 + NZ_CP009288.1 Paenibacillus durus
125 1247220 1247525 + NZ_LS483476.1 Lederbergia lentus
126 2621176 2621502 - NZ_CP030775.1 Clostridium butyricum
127 767672 767899 + NC_013216.1 Desulfofarcimen acetoxidans DSM 771
128 1183591 1183893 + NZ_CP070872.1 Lactococcus taiwanensis
129 1404589 1404849 + NC_018017.1 Desulfitobacterium dehalogenans ATCC 51507
130 152769 153080 + NZ_LR134375.1 Veillonella dispar
131 632384 632704 + NC_018631.1 Leuconostoc gelidum JB7
132 125918 126184 - NZ_CP018906.1 Lentilactobacillus curieae
133 165986 166252 + NZ_LN831776.1 Paenibacillus riograndensis SBR5
134 600837 601148 - NC_003210.1 Listeria monocytogenes EGD-e
135 2018409 2018633 - NC_008346.1 Syntrophomonas wolfei subsp. wolfei str. Goettingen G311
136 2006995 2007240 + NZ_CP065425.1 Heyndrickxia vini
137 1208958 1209245 - NZ_LS483343.1 Streptococcus ferus
138 189158 189484 + NZ_LR778174.1 Veillonella parvula
139 156471 156719 + NZ_CP009285.1 Paenibacillus borealis
140 1430928 1431242 - NZ_LR594049.1 Streptococcus gordonii
141 706686 706961 + NZ_CP011361.2 Salimicrobium jeotgali
142 3013687 3013956 - NZ_CP040924.1 Clostridium thermarum
143 1492909 1493172 + NC_015387.1 Marinithermus hydrothermalis DSM 14884
144 3158857 3159114 - NC_017098.1 Spirochaeta africana DSM 8902
145 1319702 1319947 + NC_015589.1 Desulfotomaculum ruminis DSM 2154
146 665747 665974 + NZ_CP014699.1 Streptococcus pantholopis
147 896361 896675 + NZ_CP029491.1 Streptococcus sobrinus
148 365983 366309 - NZ_CP017962.1 Virgibacillus halodenitrificans
149 71079 71306 - NZ_CP054015.1 Streptococcus gallolyticus
150 1415994 1416221 - NZ_CP039457.1 Streptococcus pasteurianus
151 4394326 4394607 - NZ_CP042593.1 Bacillus dafuensis
152 271248 271520 + NZ_CP019659.1 Paenibacillus larvae subsp. larvae
153 3450172 3450408 - NZ_CP053376.1 Bacillus amyloliquefaciens
154 595227 595463 + NZ_CP011937.1 Bacillus velezensis
155 2612601 2612888 - NC_014960.1 Anaerolinea thermophila UNI-1
156 500424 500705 + NZ_CP016312.1 Thermus brockianus
157 3513870 3514196 - NZ_CP013019.1 Clostridium pasteurianum
158 2229136 2229369 + NZ_CP017786.1 Bacillus xiamenensis
159 2167221 2167454 + NZ_CP043404.1 Bacillus safensis
160 3300902 3301186 - NZ_CP019699.1 Novibacillus thermophilus
161 3385373 3385606 - NZ_CP034943.1 Bacillus subtilis subsp. spizizenii ATCC 6633 = JCM 2499
162 3447111 3447344 - NZ_CP013984.1 Bacillus inaquosorum
163 3582936 3583175 - NC_000964.3 Bacillus subtilis subsp. subtilis str. 168
164 1617151 1617462 - NZ_CP021874.1 Enterococcus wangshanyuanii
165 3406166 3406399 - NZ_CP048852.1 Bacillus tequilensis
166 602532 602777 + NC_009633.1 Alkaliphilus metalliredigens QYMF
167 3439070 3439303 - NZ_CP033052.1 Bacillus vallismortis
168 232069 232326 + NZ_CP048104.1 Kroppenstedtia pulmonis
169 3750103 3750342 - NZ_CP023665.1 Bacillus paralicheniformis
170 3365797 3366027 - NZ_CP051464.1 Bacillus mojavensis
171 2670085 2670315 + NZ_CP029364.1 Bacillus halotolerans
172 541803 542090 - NC_014122.1 Methanocaldococcus infernus ME
173 3556149 3556388 - NC_006270.3 Bacillus licheniformis DSM 13 = ATCC 14580
174 1337004 1337246 + NC_014761.1 Oceanithermus profundus DSM 14977
175 3131066 3131299 - NZ_CP011150.1 Bacillus altitudinis
176 192570 192881 + NZ_LT906470.1 Veillonella rodentium
177 158091 158360 - NZ_CP016622.1 Parageobacillus thermoglucosidasius
178 2275282 2275581 - NZ_CP061470.1 Geobacillus zalihae
179 1376785 1377012 + NZ_CP010822.1 Thermus aquaticus Y51MC23
180 757484 757780 + NZ_CP018058.1 Geobacillus thermocatenulatus
181 2733499 2733798 - NZ_CP064060.1 Anoxybacillus caldiproteolyticus
182 550272 550559 + NZ_CP043552.1 Francisella marina
183 561188 561445 + NZ_CP015438.1 Anoxybacillus amylolyticus
184 2437137 2437406 - NZ_CP034118.1 Staphylospora marina
185 3680006 3680245 - NC_002570.2 Alkalihalobacillus halodurans C-125
186 2180242 2180544 + NC_014212.1 Meiothermus silvanus DSM 9946
187 1920678 1920950 - NZ_CP031092.1 Salicibibacter kimchii
188 1631596 1631859 - NZ_CP009654.1 Francisella frigiditurris
189 294322 294561 + NZ_CP070062.1 Coprococcus comes
190 204413 204703 + NZ_CP014342.1 Geobacillus subterraneus
191 3091042 3091338 - NC_006510.1 Geobacillus kaustophilus HTA426
192 1962123 1962419 - NZ_CP061472.1 Geobacillus thermoleovorans
193 1213306 1213593 + NC_015696.1 Francisella salina
194 1135671 1135913 + NZ_LN879430.1 Herbinix luporum
195 1778993 1779289 + NZ_CP017703.1 Aeribacillus pallidus
196 1361725 1362012 - NZ_CP016796.1 Francisella uliginis
197 811192 811479 + NZ_CP021781.1 Francisella adeliensis
198 624034 624267 - NZ_CP014141.1 Thermus parvatiensis
199 1373390 1373623 + NC_006461.1 Thermus thermophilus HB8
200 746825 747061 + NZ_CP022132.1 Francisella halioticida
201 1147110 1147343 + NZ_CP038452.1 Thermus caldilimi
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Neighborhood Conservation Analysis
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Conservation Analysis
Neighborhood Representative Chosen(Species): NC_017464.1
Sr.No. Domain Co-occurrence Frequency No. of species in which domain occurs with smORF Median distance b/w smORF and domain bearing ORFs Orientation relative to smORF PFAM Information
1 PF00475.20 0.85 171 2507 same-strand Imidazoleglycerol-phosphate dehydratase
2 PF00117.30 0.8 161 1876 same-strand Glutamine amidotransferase class-I
3 PF00977.23 0.91 182 726 same-strand Histidine biosynthesis protein
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