* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_AP022567.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF00141.25
|
1.0
|
3
|
2107
|
same-strand
|
Peroxidase
|
2
|
PF00106.27
|
1.0
|
3
|
-22
|
same-strand
|
short chain dehydrogenase
|
3
|
PF08659.12
|
1.0
|
3
|
-22
|
same-strand
|
KR domain
|
4
|
PF12250.10
|
1.0
|
3
|
742
|
same-strand
|
Arabinofuranosyltransferase N terminal
|
5
|
PF12249.10
|
1.0
|
3
|
742
|
same-strand
|
Arabinofuranosyltransferase A C terminal
|
6
|
PF04602.14
|
1.0
|
3
|
6003
|
same-strand
|
Mycobacterial cell wall arabinan synthesis protein
|
7
|
PF14896.8
|
1.0
|
3
|
6003
|
same-strand
|
EmbC C-terminal domain
|
8
|
PF17689.3
|
1.0
|
3
|
6003
|
same-strand
|
Arabinosyltransferase concanavalin like domain
|
9
|
PF09995.11
|
0.67
|
2
|
908.0
|
opposite-strand
|
ER-bound oxygenase mpaB/B'/Rubber oxygenase, catalytic domain
|
10
|
PF00440.25
|
0.67
|
2
|
1420
|
opposite-strand
|
Bacterial regulatory proteins, tetR family
|
++ More..