Result : HVO_2523
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | HVO_2523 |
| NCBI Accession ID | CP001956.1 |
| Organism | Haloferax volcanii DS2 |
| Left | 2389183 |
| Right | 2389335 |
| Strand | + |
| Nucleotide Sequence | ATGGACGACGACGCCGGACGGAACGCGTGCGCTATCGAATCCCCGAAGGGCAGACCCTGCCCCTTCTGCGGCACGTCGATGGACCACCGCCACTGCAAGTACGTCTGCCCGGAACACGGGGTCGTCTACGATTGCAGCGACACGTTCTGGTAA |
| Sequence | MDDDAGRNACAIESPKGRPCPFCGTSMDHRHCKYVCPEHGVVYDCSDTFW |
| Source of smORF | Literature-mining |
| Function | The deletion mutant is inhibited in its ability to grow in glycerol-containing medium and to swarm. It shows a gain of function phenotype in the context of growth in the presence of bile acids and has enhanced ability to form biofilm. |
| Pubmed ID | 31083437 |
| Domain | |
| Functional Category | Others |
| Uniprot ID | |
| ORF Length (Amino Acid) | 50 |
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| Conservation Analysis |
No. of Species: 17
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 3240904 | 3241056 | + | NZ_CP048738.1 | Haloferax alexandrinus |
| 2 | 2389183 | 2389335 | + | NC_013967.1 | Haloferax volcanii DS2 |
| 3 | 2492154 | 2492306 | + | NZ_CP011947.1 | Haloferax gibbonsii |
| 4 | 2732948 | 2733100 | - | NZ_CP039139.1 | Haloferax mediterranei ATCC 33500 |
| 5 | 990454 | 990591 | - | NC_014729.1 | Halogeometricum borinquense DSM 11551 |
| 6 | 2167105 | 2167248 | + | NC_008212.1 | Haloquadratum walsbyi DSM 16790 |
| 7 | 3324166 | 3324306 | - | NZ_CP058579.1 | Halobaculum salinum |
| 8 | 2545462 | 2545602 | + | NZ_CP034145.1 | Haloplanus aerogenes |
| 9 | 2453853 | 2453996 | + | NC_012029.1 | Halorubrum lacusprofundi ATCC 49239 |
| 10 | 3722282 | 3722419 | + | NC_019792.1 | Natronobacterium gregoryi SP2 |
| 11 | 3045199 | 3045324 | - | NZ_CP058335.1 | Natronomonas salina |
| 12 | 150987 | 151133 | + | NZ_CP019893.1 | Natrarchaeobaculum aegyptiacum |
| 13 | 990687 | 990812 | - | NC_020388.1 | Natronomonas moolapensis 8.8.11 |
| 14 | 977326 | 977451 | - | NC_020388.1 | Natronomonas moolapensis 8.8.11 |
| 15 | 1266156 | 1266284 | - | NZ_CP019327.1 | Haloterrigena daqingensis |
| 16 | 391959 | 392084 | + | NZ_CP016804.1 | Halodesulfurarchaeum formicicum |
| 17 | 3735097 | 3735243 | + | NC_019974.1 | Natronococcus occultus SP4 |
| 18 | 1658222 | 1658398 | + | NZ_CP024047.1 | Natrarchaeobaculum sulfurireducens |
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