* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP053416.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF00857.22
|
1.0
|
2
|
4830.0
|
opposite-strand
|
Isochorismatase family
|
2
|
PF00122.22
|
1.0
|
2
|
1139.0
|
same-strand
|
E1-E2 ATPase
|
3
|
PF00702.28
|
1.0
|
2
|
1139.0
|
same-strand
|
haloacid dehalogenase-like hydrolase
|
4
|
PF00690.28
|
1.0
|
2
|
1139.0
|
same-strand
|
Cation transporter/ATPase, N-terminus
|
5
|
PF00689.23
|
1.0
|
2
|
1139.0
|
same-strand
|
Cation transporting ATPase, C-terminus
|
6
|
PF02308.18
|
1.0
|
2
|
235.5
|
same-strand
|
MgtC family
|
7
|
PF00892.22
|
1.0
|
2
|
248.5
|
opposite-strand
|
EamA-like transporter family
|
8
|
PF07071.13
|
1.0
|
2
|
2432.0
|
same-strand
|
KDGP aldolase
|
++ More..