Result : AapA1
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | AapA1 |
| NCBI Accession ID | 6GIF_A (PDB ID) |
| Organism | Helicobacter pylori |
| Left | |
| Right | |
| Strand | |
| Nucleotide Sequence | |
| Sequence | MATKHGKNSWKTLYLKISFLGCKVVALLKR |
| Source of smORF | Literature-mining |
| Function | 30 amino acid type-1 toxin encoded chromosomally in Helicobacter pylori. It has low hydrophobicity but nanomolar affinity for membrane. It has 3 parts: a positively charged N-terminal, basic C terminal and a TM helix. Recently implicated in coccoid formation in patients and under oxidative stress. |
| Pubmed ID | 31476357 33229580 |
| Domain | |
| Functional Category | Toxin type 1 |
| Uniprot ID | |
| ORF Length (Amino Acid) | 30 |
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| Conservation Analysis |
No. of Species: 4
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 1600552 | 1600644 | - | NC_017735.1 | Helicobacter cetorum MIT 99-5656 |
| 2 | 894013 | 894105 | + | NC_017735.1 | Helicobacter cetorum MIT 99-5656 |
| 3 | 893006 | 893098 | + | NC_017735.1 | Helicobacter cetorum MIT 99-5656 |
| 4 | 1020489 | 1020578 | - | NC_017735.1 | Helicobacter cetorum MIT 99-5656 |
| 5 | 1654655 | 1654747 | + | NC_017735.1 | Helicobacter cetorum MIT 99-5656 |
| 6 | 1658220 | 1658312 | + | NC_017735.1 | Helicobacter cetorum MIT 99-5656 |
| 7 | 863890 | 863979 | - | NC_017735.1 | Helicobacter cetorum MIT 99-5656 |
| 8 | 603874 | 603966 | - | NC_017735.1 | Helicobacter cetorum MIT 99-5656 |
| 9 | 418660 | 418752 | - | NC_017735.1 | Helicobacter cetorum MIT 99-5656 |
| 10 | 1465521 | 1465613 | - | NC_008229.1 | Helicobacter acinonychis str. Sheeba |
| 11 | 1463951 | 1464043 | + | NC_017379.1 | Helicobacter pylori Puno135 |
| 12 | 564113 | 564205 | + | NC_014810.2 | Helicobacter felis ATCC 49179 |
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