* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP010450.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF06160.14
|
0.6
|
3
|
3269
|
same-strand
|
Septation ring formation regulator, EzrA
|
2
|
PF07997.13
|
0.6
|
3
|
2209
|
opposite-strand
|
Protein of unknown function (DUF1694)
|
3
|
PF00113.24
|
0.6
|
3
|
675
|
same-strand
|
Enolase, C-terminal TIM barrel domain
|
4
|
PF03952.18
|
0.6
|
3
|
675
|
same-strand
|
Enolase, N-terminal domain
|
5
|
PF00881.26
|
1.0
|
5
|
222
|
same-strand
|
Nitroreductase family
|
6
|
PF02624.18
|
1.0
|
5
|
2247
|
same-strand
|
YcaO cyclodehydratase, ATP-ad Mg2+-binding
|
7
|
PF02517.18
|
1.0
|
5
|
3580
|
same-strand
|
Type II CAAX prenyl endopeptidase Rce1-like
|
8
|
PF19393.1
|
1.0
|
5
|
4249
|
same-strand
|
Family of unknown function (DUF5968)
|
++ More..