Protein Information |
Information Type | Description |
---|---|
Protein name | UPF0150 protein TM_1311 |
NCBI Accession ID | AE000512.1 |
Organism | Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) |
Left | 1332530 |
Right | 1332742 |
Strand | - |
Nucleotide Sequence | ATGGAGACGCAAAAGGAGATAGTCTTCATCGCCGTGGAATCGGAGGACGGAGGATACATCGAAAAAACTGAGAGGTATTCGATATTCACGCAGGGAGATACCTGGGAAGAGCTCCTTGAGATGATAAAAGATGCGGTCAAATGCCATTTCGATGAGGGTGCTCCTAAGTACGTACATGCTCGCTTTGTGAAGGATGTGACGATTGCGGTATGA |
Sequence | METQKEIVFIAVESEDGGYIEKTERYSIFTQGDTWEELLEMIKDAVKCHFDEGAPKYVHARFVKDVTIAV |
Source of smORF | Swiss-Prot |
Function | |
Pubmed ID | 10360571 |
Domain | |
Functional Category | Others |
Uniprot ID | Q9X137 |
ORF Length (Amino Acid) | 70 |
Conservation Analysis |
Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
---|---|---|---|---|---|
1 | 1485615 | 1485827 | + | NC_013642.1 | Thermotoga naphthophila RKU-10 |
2 | 1461365 | 1461577 | + | NC_009486.1 | Thermotoga petrophila RKU-1 |
3 | 1482510 | 1482722 | + | NC_023151.1 | Thermotoga maritima MSB8 |
4 | 1232512 | 1232724 | + | NC_011978.1 | Thermotoga neapolitana DSM 4359 |
5 | 416355 | 416561 | + | NC_009483.1 | Geobacter uraniireducens Rf4 |
6 | 1767024 | 1767227 | + | NC_013849.1 | Ferroglobus placidus DSM 10642 |
7 | 1556903 | 1557085 | - | NC_015320.1 | Archaeoglobus veneficus SNP6 |
8 | 1289896 | 1290084 | - | NC_015707.1 | Pseudothermotoga thermarum DSM 5069 |
Neighborhood Conservation Analysis |
Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
---|---|---|---|---|---|---|
1 | PF07927.14 | 1.0 | 8 | 10.0 | same-strand | HicA toxin of bacterial toxin-antitoxin, |