ProsmORF-pred
Result : Q9WX37
Protein Information
Information Type Description
Protein name Putative RNA-binding protein RbpE
NCBI Accession ID BA000019.2
Organism Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
Left 3374343
Right 3374642
Strand -
Nucleotide Sequence ATGTCAATATACGTAGGGAATCTGTCCTACAGCGTCACACAAGACGACCTTACTAAAGTATTTTCCGAGTACGGTTCAGTCACACGCGTTCAGTTACCCACAGATAGAGAAACCGGACGTGTTCGCGGTTTTGGTTTCGTAGAAATGGAATCATCAGCCGCAGAAGATGCAGCCATTCAAGCTCTTGATGGCGCAGAATGGATGGGGCGTGTACTTAAAGTTAATAAAGCTCGTCCACGGGAAGAGAAAGGCGCTCGTTCCGGTGGGGGTAGTTGGTCAAGAAATAATGGTGGCTACTAA
Sequence MSIYVGNLSYSVTQDDLTKVFSEYGSVTRVQLPTDRETGRVRGFGFVEMESSAAEDAAIQALDGAEWMGRVLKVNKARPREEKGARSGGGSWSRNNGGY
Source of smORF Swiss-Prot
Function The ORF matches to the profile of cl17169. Profile Description: RNA recognition motif (RRM) superfamily. Crp79, also called meiotic expression up-regulated protein 5 (Mug5), or polyadenylate-binding protein crp79, or PABP, or poly(A)-binding protein, is an auxiliary mRNA export factor that binds the poly(A) tail of mRNA and is involved in the export of mRNA from the nucleus to the cytoplasm. Mug28 is a meiosis-specific protein that regulates spore wall formation. Members in this family contain three RNA recognition motifs (RRMs), also termed RBDs (RNA binding domains) or RNPs (ribonucleoprotein domains). The model corresponds to the three RRM motif.
Pubmed ID 11759840
Domain CDD:418427
Functional Category RNA-binding
Uniprot ID Q9WX37
ORF Length (Amino Acid) 99
++ More..
Conservation Analysis
Conservation Analysis
No. of Species: 134
Sr.No. Left Position Right Position Strand NCBI Accession id Species Name
1 1319585 1319884 - NZ_CP047242.1 Trichormus variabilis 0441
2 5201582 5201893 + NZ_CP047242.1 Trichormus variabilis 0441
3 1464512 1464823 + NZ_CP047242.1 Trichormus variabilis 0441
4 740553 740861 + NZ_CP047242.1 Trichormus variabilis 0441
5 3389630 3389914 + NZ_CP047242.1 Trichormus variabilis 0441
6 2081263 2081550 - NC_019751.1 Calothrix sp. PCC 6303
7 62512 62808 + NC_019751.1 Calothrix sp. PCC 6303
8 5428963 5429280 + NC_019751.1 Calothrix sp. PCC 6303
9 4492472 4492783 + NC_019695.1 Chroococcidiopsis thermalis PCC 7203
10 6085612 6085917 - NC_019695.1 Chroococcidiopsis thermalis PCC 7203
11 2792385 2792681 - NC_019695.1 Chroococcidiopsis thermalis PCC 7203
12 52530 52829 + NZ_AP014638.1 Leptolyngbya boryana IAM M-101
13 51956 52261 - NZ_AP014638.1 Leptolyngbya boryana IAM M-101
14 2461089 2461391 - NZ_AP014638.1 Leptolyngbya boryana IAM M-101
15 1576477 1576725 - NZ_AP014638.1 Leptolyngbya boryana IAM M-101
16 2170096 2170392 - NZ_AP014638.1 Leptolyngbya boryana IAM M-101
17 1842938 1843255 + NC_011729.1 Gloeothece citriformis PCC 7424
18 4829678 4829971 - NC_011729.1 Gloeothece citriformis PCC 7424
19 1193300 1193590 - NC_011729.1 Gloeothece citriformis PCC 7424
20 3169315 3169608 - NC_011729.1 Gloeothece citriformis PCC 7424
21 2950519 2950833 + NC_010628.1 Nostoc punctiforme PCC 73102
22 935778 936080 + NC_010628.1 Nostoc punctiforme PCC 73102
23 1134981 1135301 + NC_010628.1 Nostoc punctiforme PCC 73102
24 4768960 4769265 - NC_014248.1 'Nostoc azollae' 0708
25 4104327 4104635 - NC_014248.1 'Nostoc azollae' 0708
26 1165936 1166235 + NC_014248.1 'Nostoc azollae' 0708
27 3541408 3541719 + NZ_CP054698.1 Nostoc edaphicum CCNP1411
28 4581774 4582079 - NZ_CP054698.1 Nostoc edaphicum CCNP1411
29 474930 475250 + NZ_CP054698.1 Nostoc edaphicum CCNP1411
30 2532778 2533086 + NC_019753.1 Crinalium epipsammum PCC 9333
31 1165823 1166134 + NC_019753.1 Crinalium epipsammum PCC 9333
32 2121475 2121783 + NC_019753.1 Crinalium epipsammum PCC 9333
33 6759493 6759780 - NC_019729.1 Oscillatoria nigro-viridis PCC 7112
34 6788617 6788925 - NC_019729.1 Oscillatoria nigro-viridis PCC 7112
35 3080033 3080332 - NC_019689.1 Pleurocapsa sp. PCC 7327
36 4984755 4985051 - NC_019689.1 Pleurocapsa sp. PCC 7327
37 3022520 3022831 - NC_019689.1 Pleurocapsa sp. PCC 7327
38 4045779 4046072 - NC_019689.1 Pleurocapsa sp. PCC 7327
39 3879202 3879501 + NC_019689.1 Pleurocapsa sp. PCC 7327
40 136339 136620 - NC_019689.1 Pleurocapsa sp. PCC 7327
41 8073349 8073648 - NZ_CP024785.1 Nostoc flagelliforme CCNUN1
42 1916010 1916309 + NZ_CP024785.1 Nostoc flagelliforme CCNUN1
43 7149470 7149799 + NZ_CP024785.1 Nostoc flagelliforme CCNUN1
44 1737734 1738021 - NC_019780.1 Dactylococcopsis salina PCC 8305
45 158665 158964 - NC_019780.1 Dactylococcopsis salina PCC 8305
46 1561734 1562030 - NZ_CP060822.1 Cylindrospermopsis curvispora GIHE-G1
47 2898959 2899270 + NZ_CP060822.1 Cylindrospermopsis curvispora GIHE-G1
48 930943 931221 - NZ_CP060822.1 Cylindrospermopsis curvispora GIHE-G1
49 1808577 1808864 + NZ_CP018092.1 Synechococcus lividus PCC 6715
50 1414466 1414711 + NZ_CP018092.1 Synechococcus lividus PCC 6715
51 6114777 6115085 - NC_019771.1 Anabaena cylindrica PCC 7122
52 1790798 1791088 - NC_019748.1 Stanieria cyanosphaera PCC 7437
53 41789 42097 - NC_019748.1 Stanieria cyanosphaera PCC 7437
54 1996936 1997226 - NC_019748.1 Stanieria cyanosphaera PCC 7437
55 3628951 3629235 - NC_019748.1 Stanieria cyanosphaera PCC 7437
56 2214129 2214413 - NZ_AP018202.1 Thermostichus vulcanus NIES-2134
57 215663 215935 - NZ_AP018202.1 Thermostichus vulcanus NIES-2134
58 2345110 2345394 - NC_004113.1 Thermosynechococcus vestitus BP-1
59 1505782 1506054 + NC_004113.1 Thermosynechococcus vestitus BP-1
60 2601475 2601771 - NZ_CP021983.2 Halomicronema hongdechloris C2206
61 4984934 4985245 - NZ_CP021983.2 Halomicronema hongdechloris C2206
62 4535236 4535481 + NZ_CP021983.2 Halomicronema hongdechloris C2206
63 6163857 6164156 + NZ_CP031941.1 Nostoc sphaeroides
64 4370143 4370451 + NC_014501.1 Gloeothece verrucosa PCC 7822
65 5694020 5694349 + NC_014501.1 Gloeothece verrucosa PCC 7822
66 5102540 5102836 + NC_014501.1 Gloeothece verrucosa PCC 7822
67 1482862 1483155 + NC_014501.1 Gloeothece verrucosa PCC 7822
68 1810909 1811202 + NC_010296.1 Microcystis aeruginosa NIES-843
69 1810076 1810369 + NC_010296.1 Microcystis aeruginosa NIES-843
70 4216173 4216475 + NC_010296.1 Microcystis aeruginosa NIES-843
71 2935188 2935484 + NC_010296.1 Microcystis aeruginosa NIES-843
72 420830 421159 - NC_014534.1 Gloeothece verrucosa PCC 7822
73 1335006 1335296 + NZ_CP042326.1 Euhalothece natronophila Z-M001
74 2260721 2261008 - NZ_CP042326.1 Euhalothece natronophila Z-M001
75 44243 44548 - NC_019776.1 Cyanobacterium aponinum PCC 10605
76 35997 36242 - NC_019776.1 Cyanobacterium aponinum PCC 10605
77 5609853 5610113 - NC_009925.1 Acaryochloris marina MBIC11017
78 556808 557095 + NC_009925.1 Acaryochloris marina MBIC11017
79 2656095 2656382 + NC_009925.1 Acaryochloris marina MBIC11017
80 2014474 2014722 + NC_009925.1 Acaryochloris marina MBIC11017
81 54743 55012 - NC_009926.1 Acaryochloris marina MBIC11017
82 90919 91206 - NC_009926.1 Acaryochloris marina MBIC11017
83 67539 67826 - NC_009926.1 Acaryochloris marina MBIC11017
84 566 853 + NC_009929.1 Acaryochloris marina MBIC11017
85 72752 73027 - NC_009928.1 Acaryochloris marina MBIC11017
86 53557 53802 - NC_009928.1 Acaryochloris marina MBIC11017
87 10409 10696 + NZ_CP042329.1 Euhalothece natronophila Z-M001
88 977493 977771 + NZ_CP032101.1 Malaciobacter marinus
89 1007398 1007676 + NZ_CP042812.1 Malaciobacter canalis
90 8750838 8751098 + NZ_CP042425.1 Limnoglobus roseus
91 749122 749376 - NC_005090.1 Wolinella succinogenes DSM 1740
92 2812016 2812300 + NZ_CP036299.1 Planctopirus ephydatiae
93 1894725 1895012 + NC_014148.1 Planctopirus limnophila DSM 3776
94 911675 911953 + NZ_CP031218.1 Malaciobacter halophilus
95 335656 335925 - NZ_CP014230.1 Desulfomicrobium orale DSM 12838
96 1463897 1464160 - NZ_CP014230.1 Desulfomicrobium orale DSM 12838
97 3128565 3128849 + NC_013851.1 Allochromatium vinosum DSM 180
98 339439 339714 + NC_013851.1 Allochromatium vinosum DSM 180
99 1239096 1239350 + NC_012115.1 Nautilia profundicola AmH
100 7042045 7042338 - NZ_AP017422.1 Filimonas lacunae
101 1980185 1980463 - NC_014166.1 Arcobacter nitrofigilis DSM 7299
102 5853819 5854124 - NZ_CP032157.1 Paraflavitalea soli
103 2124334 2124618 + NC_019940.1 Thioflavicoccus mobilis 8321
104 455565 455843 + NC_007645.1 Hahella chejuensis KCTC 2396
105 47747 48028 + NZ_CP032099.1 Aliarcobacter skirrowii CCUG 10374
106 878238 878516 + NZ_CP032098.1 Malaciobacter molluscorum LMG 25693
107 219183 219473 + NC_019675.1 Cyanobium gracile PCC 6307
108 104286 104552 + NZ_CP032100.1 Arcobacter suis CECT 7833
109 2275692 2275973 - NZ_CP054051.1 Aliarcobacter cibarius
110 2409432 2409677 + NZ_CP039543.1 Desulfovibrio marinus
111 2241083 2241346 - NZ_CP039543.1 Desulfovibrio marinus
112 1254638 1254913 - NZ_CP048878.1 Spartinivicinus ruber
113 1363184 1363459 + NZ_CP048878.1 Spartinivicinus ruber
114 1363979 1364254 - NZ_CP048878.1 Spartinivicinus ruber
115 1204383 1204658 + NZ_CP048878.1 Spartinivicinus ruber
116 1228040 1228291 + NC_016629.1 Desulfocurvibacter africanus subsp. africanus str. Walvis Bay
117 1182028 1182330 - NC_016629.1 Desulfocurvibacter africanus subsp. africanus str. Walvis Bay
118 2066000 2066305 + NC_016629.1 Desulfocurvibacter africanus subsp. africanus str. Walvis Bay
119 47631 47945 + NC_016629.1 Desulfocurvibacter africanus subsp. africanus str. Walvis Bay
120 3574706 3575023 + NC_017079.1 Caldilinea aerophila DSM 14535 = NBRC 104270
121 3573032 3573307 + NC_014844.1 Pseudodesulfovibrio aespoeensis Aspo-2
122 921691 921954 + NC_014844.1 Pseudodesulfovibrio aespoeensis Aspo-2
123 2977159 2977422 - NC_014844.1 Pseudodesulfovibrio aespoeensis Aspo-2
124 6975 7289 + NC_016609.1 Niastella koreensis GR20-10
125 4025763 4026050 - NC_016609.1 Niastella koreensis GR20-10
126 4337442 4337756 - NC_016609.1 Niastella koreensis GR20-10
127 1793232 1793540 + NC_016609.1 Niastella koreensis GR20-10
128 14228 14494 + NC_020127.1 Lawsonia intracellularis N343
129 45777 46058 + NZ_CP036246.2 [Arcobacter] porcinus
130 124291 124557 + NZ_CP053840.1 Arcobacter venerupis
131 1438312 1438563 - NZ_CP036281.1 Polystyrenella longa
132 4613330 4613629 + NZ_CP037755.1 Pseudocnuella soli
133 814098 814361 - NC_007519.1 Desulfovibrio alaskensis G20
134 2852159 2852434 + NZ_CP039268.1 Thermochromatium tepidum ATCC 43061
135 1929712 1929990 + NZ_AP023212.1 Hydrogenimonas urashimensis
136 132827 133093 + NZ_CP042652.1 Pseudoarcobacter acticola
137 819235 819555 - NZ_LT906459.1 Odoribacter splanchnicus
138 1966347 1966628 + NZ_CP032823.1 Aliarcobacter cryaerophilus ATCC 43158
139 127200 127466 + NZ_CP053835.1 Arcobacter defluvii
140 45723 45989 - NZ_CP031217.1 Halarcobacter bivalviorum
141 3169215 3169487 - NZ_CP007031.1 Marichromatium purpuratum 984
142 2707992 2708294 - NZ_CP051774.1 Luteolibacter luteus
143 227117 227368 - NC_016633.1 Sphaerochaeta pleomorpha str. Grapes
144 107786 108052 + NZ_CP032097.1 Arcobacter ellisii
145 564277 564522 - NZ_AP018676.1 Helicobacter cinaedi
146 1344123 1344395 - NC_011059.1 Prosthecochloris aestuarii DSM 271
147 593681 593932 - NZ_CP040463.1 Caminibacter mediatlanticus TB-2
148 874550 874849 - NZ_AP017928.1 Methylocaldum marinum
149 3611511 3611798 + NZ_AP017928.1 Methylocaldum marinum
150 137342 137608 - NZ_CP014229.1 Desulfovibrio fairfieldensis
151 1055736 1056029 + NZ_CP026538.1 Desulfovibrio carbinolicus
152 3906948 3907241 - NC_012796.1 Desulfovibrio magneticus RS-1
153 1631468 1631752 + NZ_CP040449.1 Aeromonas simiae
154 420370 420636 + NZ_CP046400.1 Pseudodesulfovibrio cashew
155 2314915 2315166 + NC_017310.1 Desulfovibrio vulgaris RCH1
156 669066 669374 + NZ_CP035708.1 Sphaerotilus natans subsp. sulfidivorans
157 878372 878629 - NC_013173.1 Desulfomicrobium baculatum DSM 4028
158 2414331 2414624 - NC_018018.1 Bernardetia litoralis DSM 6794
159 961710 961997 - NC_018018.1 Bernardetia litoralis DSM 6794
160 1707937 1708200 - NC_012881.1 Maridesulfovibrio salexigens DSM 2638
161 1979468 1979779 - NZ_CP060714.1 Diaphorobacter ruginosibacter
162 1326481 1326765 - NC_013943.1 Denitrovibrio acetiphilus DSM 12809
163 994998 995267 - NC_013943.1 Denitrovibrio acetiphilus DSM 12809
164 1060188 1060436 + NZ_AP017378.1 Desulfovibrio ferrophilus
165 525108 525371 + NZ_AP017378.1 Desulfovibrio ferrophilus
166 1657835 1658098 - NZ_AP017378.1 Desulfovibrio ferrophilus
167 733482 733754 + NC_018012.1 Thiocystis violascens DSM 198
168 2271530 2271835 - NC_013512.1 Sulfurospirillum deleyianum DSM 6946
169 4240118 4240423 - NZ_CP069450.1 Butyricimonas virosa
170 2086920 2087177 - NC_014008.1 Coraliomargarita akajimensis DSM 45221
171 1402871 1403146 - NZ_CP045508.1 Desulfolutivibrio sulfoxidireducens
172 624992 625237 - NZ_LN907858.1 Helicobacter typhlonius
173 1359192 1359440 - NZ_CP010995.1 Campylobacter iguaniorum
174 2573321 2573581 + NC_016803.1 Pseudodesulfovibrio mercurii
175 1208206 1208472 - NC_016803.1 Pseudodesulfovibrio mercurii
176 170530 170796 + NZ_CP053836.1 Halarcobacter ebronensis
177 3438328 3438636 + NC_014933.1 Bacteroides helcogenes P 36-108
178 4339131 4339412 + NC_014364.1 Sediminispirochaeta smaragdinae DSM 11293
179 2494547 2494828 - NC_014364.1 Sediminispirochaeta smaragdinae DSM 11293
180 4366600 4366866 - NC_014364.1 Sediminispirochaeta smaragdinae DSM 11293
181 2018601 2018864 + NC_013223.1 Desulfohalobium retbaense DSM 5692
182 543327 543575 + NZ_CP053828.1 Campylobacter hyointestinalis subsp. lawsonii
183 3378738 3379025 + NC_006177.1 Symbiobacterium thermophilum IAM 14863
184 3060651 3060893 - NC_006177.1 Symbiobacterium thermophilum IAM 14863
185 1232262 1232510 - NZ_CP059443.1 Campylobacter fetus
186 4569118 4569363 + NZ_LN877293.1 Bacteroides fragilis
187 2572255 2572500 - NZ_LN877293.1 Bacteroides fragilis
188 416789 417088 + NZ_CP043575.1 Comamonas koreensis
189 5814001 5814297 - NC_019892.1 Singulisphaera acidiphila DSM 18658
190 1553874 1554188 - NZ_CP042435.1 Panacibacter ginsenosidivorans
191 367928 368203 - NZ_CP011971.1 Steroidobacter denitrificans
192 2225079 2225345 + NZ_LT907975.1 Pseudodesulfovibrio profundus
193 624229 624471 - NC_015318.1 Hippea maritima DSM 10411
194 3142623 3142901 + NC_015152.1 Sphaerochaeta globosa str. Buddy
195 1199912 1200196 + NZ_CP019633.1 Sedimentisphaera cyanobacteriorum
196 2201052 2201333 - NZ_CP053837.1 Aliarcobacter faecis
197 316541 316792 + NC_004917.1 Helicobacter hepaticus ATCC 51449
198 462715 462960 + NZ_CP019684.1 Campylobacter sputorum bv. paraureolyticus LMG 11764
199 320005 320250 - NZ_CP015401.2 Bacteroides caecimuris
200 2116875 2117120 - NZ_CP015401.2 Bacteroides caecimuris
201 2041274 2041519 - NC_014734.1 Paludibacter propionicigenes WB4
202 3293471 3293737 + NZ_CP017476.1 Hydrogenophaga crassostreae
203 227354 227620 + NC_021291.1 Spiribacter salinus M19-40
204 906459 906749 + NZ_CP036278.1 Aeoliella mucimassa
205 1039792 1040037 - NZ_CP012938.1 Bacteroides ovatus
206 5142832 5143077 - NZ_CP012938.1 Bacteroides ovatus
207 2609344 2609628 - NZ_CP021023.1 Sedimentisphaera salicampi
208 1859386 1859655 + NZ_CP011125.1 Sandaracinus amylolyticus
209 1837416 1837721 + NC_017583.1 Spirochaeta thermophila DSM 6578
210 1374009 1374293 + NC_017583.1 Spirochaeta thermophila DSM 6578
211 243601 243861 + NC_022664.1 Spiribacter curvatus
212 29275 29556 - NZ_CP031367.1 Aliarcobacter trophiarum LMG 25534
213 728247 728534 - NC_010729.1 Porphyromonas gingivalis ATCC 33277
214 2613232 2613486 - NZ_CP007032.1 Desulfitobacterium metallireducens DSM 15288
215 621077 621331 + NZ_CP046996.1 Dehalobacter restrictus
216 2672391 2672648 - NZ_CP019698.1 Desulfotomaculum ferrireducens
217 1074727 1074996 - NZ_CP015772.1 Niabella ginsenosidivorans
218 186424 186669 + NC_013385.1 Ammonifex degensii KC4
219 4596143 4596394 - NC_011830.1 Desulfitobacterium hafniense DCB-2
220 2738813 2739070 - NC_009253.1 Desulfotomaculum reducens MI-1
221 3307756 3308004 - NC_021184.1 Desulfoscipio gibsoniae DSM 7213
222 262674 262925 + NC_017098.1 Spirochaeta africana DSM 8902
++ More..