Result : Q9RN14
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Uncharacterized protein pXO2-18/BXB0017/GBAA_pXO2_0017 |
| NCBI Accession ID | AF188935.1 |
| Organism | Bacillus anthracis |
| Left | 16231 |
| Right | 16509 |
| Strand | - |
| Nucleotide Sequence | ATGGATCTATTTACTATTTTTGCGATGAAATTACTAACTTACAATGATTTCTTTGACTCTGTGAGTTCTGCCTTAACAAGTTGGACTGGAAAGTTACAAGGACTTGGTATAGCGGTTATTATTTTCTGTGTATGTATTATTGCCTTCATGTTCATGTTCGGCGAAGGACCGAGCCGAACAGCGAAAAAATGGTTACTGTACATTGTTGTTGGTGGCGTTCTTTTATGGGGAGCAGGAACTTTCGCAAGTACAGTTCAAGGCGTTACAGCTGGTTTCTAA |
| Sequence | MDLFTIFAMKLLTYNDFFDSVSSALTSWTGKLQGLGIAVIIFCVCIIAFMFMFGEGPSRTAKKWLLYIVVGGVLLWGAGTFASTVQGVTAGF |
| Source of smORF | Swiss-Prot |
| Function | The ORF matches to the profile of cl01583. Profile Description: TrbC/VIRB2 family. conjugal transfer protein TrbC; Provisional |
| Pubmed ID | 10475962 12004073 18952800 |
| Domain | CDD:412973 |
| Functional Category | Others |
| Uniprot ID | Q9RN14 |
| ORF Length (Amino Acid) | 92 |
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| Conservation Analysis |
No. of Species: 3
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 15738 | 16016 | - | NC_007323.3 | Bacillus anthracis str. 'Ames Ancestor' |
| 2 | 60149 | 60427 | + | NZ_CP024110.1 | Bacillus cytotoxicus |
| 3 | 35392 | 35685 | + | NZ_CP017963.1 | Virgibacillus halodenitrificans |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_007323.3
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF12696.9 | 1.0 | 3 | 3058 | same-strand | TraM recognition site of TraD and TraG |
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