Result : Q9RN13
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Uncharacterized protein pXO2-19/BXB0018/GBAA_pXO2_0018 |
| NCBI Accession ID | AF188935.1 |
| Organism | Bacillus anthracis |
| Left | 16527 |
| Right | 16778 |
| Strand | - |
| Nucleotide Sequence | ATGGCTAGTACAACAAGAAGAAATAAGGTGGAAAAAGCACCGTATCAGGATGCTGTAACAGTGATTTTAAACAAAGAGGGAAAGACATATGAAAGTTGGTCACAAGAGATTGTGAATAGCAACTGCCTGTCCCTGTTACAAGGAGAAAATCCTAAGTGGCGAAACAAAATGTTAGAAGTCGCTGCAATGGAAATTATTGCAGATTCAGTTGTTAAACAAGAAGAAAAAAGACAAAATCAAACACACAATTAA |
| Sequence | MASTTRRNKVEKAPYQDAVTVILNKEGKTYESWSQEIVNSNCLSLLQGENPKWRNKMLEVAAMEIIADSVVKQEEKRQNQTHN |
| Source of smORF | Swiss-Prot |
| Function | |
| Pubmed ID | 10475962 12004073 18952800 |
| Domain | |
| Functional Category | Others |
| Uniprot ID | Q9RN13 |
| ORF Length (Amino Acid) | 83 |
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| Conservation Analysis |
No. of Species: 2
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 16034 | 16285 | - | NC_007323.3 | Bacillus anthracis str. 'Ames Ancestor' |
| 2 | 59880 | 60131 | + | NZ_CP024110.1 | Bacillus cytotoxicus |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_007323.3
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF12696.9 | 1.0 | 2 | 3253.5 | same-strand | TraM recognition site of TraD and TraG |
| 2 | PF04956.15 | 1.0 | 2 | 18.0 | same-strand | TrbC/VIRB2 pilin |
| 3 | PF18895.2 | 1.0 | 2 | 18.0 | same-strand | Type IV secretion system pilin |
| 4 | PF00437.22 | 1.0 | 2 | 2206.0 | same-strand | Type II/IV secretion system protein |
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