Protein Information |
Information Type | Description |
---|---|
Protein name | Uncharacterized protein pXO2-19/BXB0018/GBAA_pXO2_0018 |
NCBI Accession ID | AF188935.1 |
Organism | Bacillus anthracis |
Left | 16527 |
Right | 16778 |
Strand | - |
Nucleotide Sequence | ATGGCTAGTACAACAAGAAGAAATAAGGTGGAAAAAGCACCGTATCAGGATGCTGTAACAGTGATTTTAAACAAAGAGGGAAAGACATATGAAAGTTGGTCACAAGAGATTGTGAATAGCAACTGCCTGTCCCTGTTACAAGGAGAAAATCCTAAGTGGCGAAACAAAATGTTAGAAGTCGCTGCAATGGAAATTATTGCAGATTCAGTTGTTAAACAAGAAGAAAAAAGACAAAATCAAACACACAATTAA |
Sequence | MASTTRRNKVEKAPYQDAVTVILNKEGKTYESWSQEIVNSNCLSLLQGENPKWRNKMLEVAAMEIIADSVVKQEEKRQNQTHN |
Source of smORF | Swiss-Prot |
Function | |
Pubmed ID | 10475962 12004073 18952800 |
Domain | |
Functional Category | Others |
Uniprot ID | Q9RN13 |
ORF Length (Amino Acid) | 83 |
Conservation Analysis |
Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
---|---|---|---|---|---|
1 | 16034 | 16285 | - | NC_007323.3 | Bacillus anthracis str. 'Ames Ancestor' |
2 | 59880 | 60131 | + | NZ_CP024110.1 | Bacillus cytotoxicus |
Neighborhood Conservation Analysis |
Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
---|---|---|---|---|---|---|
1 | PF12696.9 | 1.0 | 2 | 3253.5 | same-strand | TraM recognition site of TraD and TraG |
2 | PF04956.15 | 1.0 | 2 | 18.0 | same-strand | TrbC/VIRB2 pilin |
3 | PF18895.2 | 1.0 | 2 | 18.0 | same-strand | Type IV secretion system pilin |
4 | PF00437.22 | 1.0 | 2 | 2206.0 | same-strand | Type II/IV secretion system protein |