Result : Q9PRE1
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | 50S ribosomal protein L31 |
| NCBI Accession ID | AF222894.1 |
| Organism | Ureaplasma parvum serovar 3 (strain ATCC 700970) |
| Left | 1515 |
| Right | 1802 |
| Strand | + |
| Nucleotide Sequence | ATGAGAGATATTCATCCAGTAAGCAAACCATGCGTTTATAATTGTGTAACATGTAAAAAAGAATTTATAATTGATTCTGCAGCAAAAAATACAGAAGTTGCAATTGAAGTTTGTTCAAATTGCCATACATTTTTTATTGGTAAACAAAACGCAACTACAACATTACGTGGTCGTGCTGAAAAACTAAATAATCGTTTTGAAGCTGGTTTAAATAACATTAATAAAAAACCAGAAAAGAAAAAAATACAAGGTAAATCTGAACCAAGAAAAAGTTTAAACGAATTATAA |
| Sequence | MRDIHPVSKPCVYNCVTCKKEFIIDSAAKNTEVAIEVCSNCHTFFIGKQNATTTLRGRAEKLNNRFEAGLNNINKKPEKKKIQGKSEPRKSLNEL |
| Source of smORF | Swiss-Prot |
| Function | Binds the 23S rRNA. {ECO:0000255|HAMAP-Rule:MF_00501}. |
| Pubmed ID | 11048724 |
| Domain | CDD:412343 |
| Functional Category | Ribosomal_protein |
| Uniprot ID | Q9PRE1 |
| ORF Length (Amino Acid) | 95 |
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| Conservation Analysis |
No. of Species: 2
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 1541 | 1828 | + | NC_010503.1 | Ureaplasma parvum serovar 3 str. ATCC 27815 |
| 2 | 1528 | 1815 | + | NC_011374.1 | Ureaplasma urealyticum serovar 10 str. ATCC 33699 |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_010503.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF00004.31 | 1.0 | 2 | 580.5 | same-strand | ATPase family associated with various cellular activities (AAA) |
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