Protein Information |
Information Type | Description |
---|---|
Protein name | 50S ribosomal protein L31 |
NCBI Accession ID | AF222894.1 |
Organism | Ureaplasma parvum serovar 3 (strain ATCC 700970) |
Left | 1515 |
Right | 1802 |
Strand | + |
Nucleotide Sequence | ATGAGAGATATTCATCCAGTAAGCAAACCATGCGTTTATAATTGTGTAACATGTAAAAAAGAATTTATAATTGATTCTGCAGCAAAAAATACAGAAGTTGCAATTGAAGTTTGTTCAAATTGCCATACATTTTTTATTGGTAAACAAAACGCAACTACAACATTACGTGGTCGTGCTGAAAAACTAAATAATCGTTTTGAAGCTGGTTTAAATAACATTAATAAAAAACCAGAAAAGAAAAAAATACAAGGTAAATCTGAACCAAGAAAAAGTTTAAACGAATTATAA |
Sequence | MRDIHPVSKPCVYNCVTCKKEFIIDSAAKNTEVAIEVCSNCHTFFIGKQNATTTLRGRAEKLNNRFEAGLNNINKKPEKKKIQGKSEPRKSLNEL |
Source of smORF | Swiss-Prot |
Function | Binds the 23S rRNA. {ECO:0000255|HAMAP-Rule:MF_00501}. |
Pubmed ID | 11048724 |
Domain | CDD:412343 |
Functional Category | Ribosomal_protein |
Uniprot ID | Q9PRE1 |
ORF Length (Amino Acid) | 95 |
Conservation Analysis |
Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
---|---|---|---|---|---|
1 | 1541 | 1828 | + | NC_010503.1 | Ureaplasma parvum serovar 3 str. ATCC 27815 |
2 | 1528 | 1815 | + | NC_011374.1 | Ureaplasma urealyticum serovar 10 str. ATCC 33699 |
Neighborhood Conservation Analysis |
Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
---|---|---|---|---|---|---|
1 | PF00004.31 | 1.0 | 2 | 580.5 | same-strand | ATPase family associated with various cellular activities (AAA) |