Protein Information |
Information Type | Description |
---|---|
Protein name | Uncharacterized protein UU179 |
NCBI Accession ID | AF222894.1 |
Organism | Ureaplasma parvum serovar 3 (strain ATCC 700970) |
Left | 217759 |
Right | 217980 |
Strand | + |
Nucleotide Sequence | ATGTTAATTAAACCCGCGAAACGCAGTGAAAAAATTTATACAATTATTGCTATAAAAGATAGTGTTGTAACTTTAAAAAATGATTATCAAGACGAAAAAAATATTCAAATTTACGAGTTTGATTTGCAGAATATTATTCCAGAAGTTGGTAAATTTATTAATCTAATTAAATACGATCAACAAGGTTGTTCAGTATTTGAAGAATATGATAAAAACATTTAA |
Sequence | MLIKPAKRSEKIYTIIAIKDSVVTLKNDYQDEKNIQIYEFDLQNIIPEVGKFINLIKYDQQGCSVFEEYDKNI |
Source of smORF | Swiss-Prot |
Function | |
Pubmed ID | 11048724 |
Domain | |
Functional Category | Others |
Uniprot ID | Q9PQW4 |
ORF Length (Amino Acid) | 73 |
Conservation Analysis |
Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
---|---|---|---|---|---|
1 | 217798 | 218019 | + | NC_010503.1 | Ureaplasma parvum serovar 3 str. ATCC 27815 |
2 | 201423 | 201644 | + | NC_011374.1 | Ureaplasma urealyticum serovar 10 str. ATCC 33699 |
Neighborhood Conservation Analysis |
Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
---|---|---|---|---|---|---|
1 | PF00579.27 | 1.0 | 2 | 1787.0 | opposite-strand | tRNA synthetases class I (W and Y) |
2 | PF03960.17 | 1.0 | 2 | 1274.0 | same-strand | ArsC family |