* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_010503.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF01367.22
|
1.0
|
2
|
3009.0
|
same-strand
|
5'-3' exonuclease, C-terminal SAM fold
|
2
|
PF07733.14
|
1.0
|
2
|
279.0
|
same-strand
|
Bacterial DNA polymerase III alpha NTPase domain
|
3
|
PF01368.22
|
1.0
|
2
|
509.0
|
same-strand
|
DHH family
|
4
|
PF02568.16
|
1.0
|
2
|
1065.5
|
same-strand
|
Thiamine biosynthesis protein (ThiI)
|
5
|
PF06508.15
|
1.0
|
2
|
1065.5
|
same-strand
|
Queuosine biosynthesis protein QueC
|
++ More..