Result : Q9PIP2
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Uncharacterized protein Cj0253 |
| NCBI Accession ID | AL111168.1 |
| Organism | Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168) |
| Left | 232291 |
| Right | 232554 |
| Strand | + |
| Nucleotide Sequence | GTGGTAAATTTGTGCGATCTTAAAAAAGAACCTCAGATCAATTATCCTACTTTTTGGGATTATAAGGTGATTTTTGAGGTGCATGTTAAGGCAAGTGAAATTTTTGAAGAAATTTTAGGTCAAAGAGAATATAAATTTAAACATTCGAATTCAAGTGCGAGTGGAAAATATCAAAGTTATTTGTTAAATGTTTATGTTGATAGCAAAAAAGATCGTTTGGATATATTTGATAAATTAAAAGCTAAAGCAAAATTTGTACTTTAA |
| Sequence | MVNLCDLKKEPQINYPTFWDYKVIFEVHVKASEIFEEILGQREYKFKHSNSSASGKYQSYLLNVYVDSKKDRLDIFDKLKAKAKFVL |
| Source of smORF | Swiss-Prot |
| Function | The ORF matches to the profile of cl01102. Profile Description: Protein of unknown function (DUF493). hypothetical protein; Provisional |
| Pubmed ID | 10688204 |
| Domain | CDD:412741 |
| Functional Category | Others |
| Uniprot ID | Q9PIP2 |
| ORF Length (Amino Acid) | 87 |
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| Conservation Analysis |
No. of Species: 12
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 232291 | 232554 | + | NC_002163.1 | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
| 2 | 841777 | 842031 | - | NZ_CP031611.1 | Campylobacter hepaticus |
| 3 | 1714841 | 1715104 | + | NZ_CP020867.1 | Campylobacter cuniculorum DSM 23162 = LMG 24588 |
| 4 | 98828 | 99091 | - | NZ_CP053825.1 | Campylobacter armoricus |
| 5 | 135094 | 135357 | - | NZ_CP053848.1 | Campylobacter ornithocola |
| 6 | 126844 | 127107 | - | NC_012039.1 | Campylobacter lari RM2100 |
| 7 | 31364 | 31627 | + | NZ_CP053849.1 | Campylobacter upsaliensis RM3940 |
| 8 | 1740330 | 1740584 | - | NZ_CP020478.1 | Campylobacter helveticus |
| 9 | 129719 | 129982 | - | NZ_CP007773.1 | Campylobacter subantarcticus LMG 24377 |
| 10 | 771126 | 771389 | - | NZ_CP063079.1 | Campylobacter peloridis |
| 11 | 115500 | 115763 | - | NZ_CP007774.1 | Campylobacter volucris LMG 24379 |
| 12 | 114084 | 114347 | - | NZ_CP007770.1 | Campylobacter insulaenigrae NCTC 12927 |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_002163.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF01967.23 | 1.0 | 12 | -22.0 | same-strand | MoaC family |
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