Protein Information |
Information Type | Description |
---|---|
Protein name | Probable tautomerase Cj0270 (EC 5.3.2.-) |
NCBI Accession ID | AL111168.1 |
Organism | Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168) |
Left | 248747 |
Right | 248953 |
Strand | + |
Nucleotide Sequence | ATGCCATTAGTAAATATCAAATTAGCAAAGCCGTCTTTAAGCAAGGAGCAAAAAGCGGAACTTATAGCTGATATTACCGAACTTTTAAGCACGAAATATAATAAAAGTAAAGAAAGAGTTGTTGTGGTTTTAGAAGATGTGGAAAATTATGACATAGGCTTTGGCGGAGAAAGTGTAGAAGCTATCAAAGCAAAGGCAAGTAAATGA |
Sequence | MPLVNIKLAKPSLSKEQKAELIADITELLSTKYNKSKERVVVVLEDVENYDIGFGGESVEAIKAKASK |
Source of smORF | Swiss-Prot |
Function | The ORF matches to the profile of cl00235. Profile Description: N/A. This family includes the enzyme 4-oxalocrotonate tautomerase, which catalyzes the ketonisation of 2-hydroxymuconate to 2-oxo-3-hexenedioate. |
Pubmed ID | 10688204 |
Domain | CDD:412246 |
Functional Category | Others |
Uniprot ID | Q9PIM5 |
ORF Length (Amino Acid) | 68 |
Conservation Analysis |
Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
---|---|---|---|---|---|
1 | 248747 | 248953 | + | NC_002163.1 | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
2 | 1356438 | 1356647 | - | NZ_CP007774.1 | Campylobacter volucris LMG 24379 |
3 | 1397852 | 1398058 | + | NZ_CP031611.1 | Campylobacter hepaticus |
4 | 204957 | 205163 | + | NZ_CP053849.1 | Campylobacter upsaliensis RM3940 |
5 | 1569953 | 1570153 | - | NZ_CP020478.1 | Campylobacter helveticus |
6 | 76593 | 76793 | + | NZ_CP022347.1 | Campylobacter avium LMG 24591 |
7 | 1701477 | 1701689 | - | NZ_CP020867.1 | Campylobacter cuniculorum DSM 23162 = LMG 24588 |
8 | 1658591 | 1658797 | - | NZ_CP007773.1 | Campylobacter subantarcticus LMG 24377 |
9 | 1350712 | 1350918 | - | NC_012039.1 | Campylobacter lari RM2100 |
10 | 1472487 | 1472693 | - | NZ_CP053848.1 | Campylobacter ornithocola |
11 | 1427125 | 1427325 | - | NZ_CP053825.1 | Campylobacter armoricus |
12 | 471595 | 471801 | - | NZ_CP063079.1 | Campylobacter peloridis |
13 | 1308448 | 1308654 | - | NZ_CP007770.1 | Campylobacter insulaenigrae NCTC 12927 |
14 | 3438804 | 3439010 | + | NZ_CP047045.1 | Terricaulis silvestris |
Neighborhood Conservation Analysis |
Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
---|---|---|---|---|---|---|
1 | PF09624.12 | 0.71 | 10 | 2448.5 | opposite-strand | Protein of unknown function (DUF2393) |
2 | PF01145.27 | 0.71 | 10 | 1041.0 | opposite-strand | SPFH domain / Band 7 family |
3 | PF01063.21 | 0.71 | 10 | 116.0 | opposite-strand | Amino-transferase class IV |
4 | PF00578.23 | 0.93 | 13 | -3 | same-strand | AhpC/TSA family |
5 | PF08534.12 | 0.93 | 13 | -3 | same-strand | Redoxin |
6 | PF02630.16 | 0.86 | 12 | -3.0 | same-strand | SCO1/SenC |
7 | PF02677.16 | 0.93 | 13 | 452 | same-strand | Epoxyqueuosine reductase QueH |
8 | PF07977.15 | 0.86 | 12 | 1597.5 | same-strand | FabA-like domain |
9 | PF00132.26 | 0.86 | 12 | 2037.5 | same-strand | Bacterial transferase hexapeptide (six repeats) |
10 | PF13720.8 | 0.86 | 12 | 2037.5 | same-strand | Udp N-acetylglucosamine O-acyltransferase; Domain 2 |
11 | PF07724.16 | 0.71 | 10 | 2818.0 | same-strand | AAA domain (Cdc48 subfamily) |
12 | PF00004.31 | 0.71 | 10 | 2818.0 | same-strand | ATPase family associated with various cellular activities (AAA) |
13 | PF10431.11 | 0.71 | 10 | 2818.0 | same-strand | C-terminal, D2-small domain, of ClpB protein |
14 | PF06689.15 | 0.71 | 10 | 2818.0 | same-strand | ClpX C4-type zinc finger |