Result : Q9PC73
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Probable Fe(2+)-trafficking protein |
| NCBI Accession ID | |
| Organism | Xylella fastidiosa (strain 9a5c) |
| Left | |
| Right | |
| Strand | |
| Nucleotide Sequence | |
| Sequence | MQRIIFCEYEQRDTEGLDFVPYPGELGQKIFACIGKVGWAAWLVHQTMLINENRLSPRNPSHRAFLEEELNKFLFERRVAKPEGYIEPDA |
| Source of smORF | Swiss-Prot |
| Function | Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. {ECO:0000255|HAMAP-Rule:MF_00686}. |
| Pubmed ID | 10910347 |
| Domain | CDD:412743 |
| Functional Category | Others |
| Uniprot ID | Q9PC73 |
| ORF Length (Amino Acid) | 90 |
++ More..
| Conservation Analysis |
No. of Species: 231
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 1095043 | 1095315 | + | NC_004556.1 | Xylella fastidiosa Temecula1 |
| 2 | 1421972 | 1422244 | + | NZ_CP053627.1 | Xylella taiwanensis |
| 3 | 2937445 | 2937723 | + | NZ_LT853882.1 | Xanthomonas fragariae |
| 4 | 2398198 | 2398476 | + | NZ_CP046570.1 | Xanthomonas albilineans |
| 5 | 2019633 | 2019911 | - | NZ_CP058243.1 | Xanthomonas campestris pv. raphani |
| 6 | 3071137 | 3071412 | + | NZ_CP048044.1 | Xanthomonas citri |
| 7 | 2022443 | 2022721 | - | NZ_CP028127.1 | Xanthomonas vasicola pv. vasculorum |
| 8 | 2956800 | 2957075 | + | NZ_CP072268.1 | Xanthomonas euvesicatoria pv. alfalfae |
| 9 | 1590114 | 1590392 | - | NZ_CP007810.1 | Xanthomonas oryzae pv. oryzicola |
| 10 | 871837 | 872115 | + | NZ_CP018725.1 | Xanthomonas vesicatoria ATCC 35937 |
| 11 | 2198922 | 2199200 | - | NZ_CP033326.1 | Xanthomonas cucurbitae |
| 12 | 1551958 | 1552236 | + | NZ_CP016878.1 | Xanthomonas hortorum |
| 13 | 1843716 | 1843991 | - | NZ_CP012900.1 | Stenotrophomonas acidaminiphila |
| 14 | 531995 | 532273 | + | NZ_CP043476.1 | Xanthomonas hyacinthi |
| 15 | 1727826 | 1728095 | - | NZ_LS483377.1 | Stenotrophomonas maltophilia |
| 16 | 3686069 | 3686338 | + | NZ_CP060731.1 | Pseudoxanthomonas mexicana |
| 17 | 227208 | 227480 | - | NZ_CP071517.1 | Lysobacter arenosi |
| 18 | 3039403 | 3039672 | + | NZ_CP046603.1 | Lysobacter soli |
| 19 | 1791024 | 1791293 | - | NZ_CP037883.1 | Stenotrophomonas indicatrix |
| 20 | 2003741 | 2004010 | - | NZ_CP011129.1 | Lysobacter antibioticus |
| 21 | 3857477 | 3857746 | + | NZ_CP011131.1 | Lysobacter gummosus |
| 22 | 1879471 | 1879740 | - | NZ_AP014940.1 | Lysobacter enzymogenes |
| 23 | 1159887 | 1160165 | - | NC_016147.2 | Pseudoxanthomonas spadix BD-a59 |
| 24 | 2501976 | 2502248 | - | NZ_CP060820.1 | Lysobacter solisilvae (ex Woo and Kim 2020) |
| 25 | 432647 | 432922 | + | NZ_CP042218.1 | Luteimonas granuli |
| 26 | 1890153 | 1890422 | - | NZ_CP023465.1 | Lysobacter capsici |
| 27 | 1395717 | 1395986 | + | NZ_CP029556.1 | Lysobacter oculi |
| 28 | 1288359 | 1288634 | - | NZ_CP029843.1 | Lysobacter maris |
| 29 | 1074088 | 1074363 | - | NZ_CP041242.1 | Lysobacter alkalisoli |
| 30 | 2936457 | 2936732 | + | NZ_CP023406.1 | Luteimonas chenhongjianii |
| 31 | 3729831 | 3730109 | - | NC_019902.2 | Thioalkalivibrio nitratireducens DSM 14787 |
| 32 | 317881 | 318159 | + | NZ_CP007029.1 | Thioalkalivibrio paradoxus ARh 1 |
| 33 | 92560 | 92838 | - | NZ_CP014841.1 | Dyella thiooxydans |
| 34 | 323036 | 323305 | + | NZ_CP061280.1 | Mannheimia bovis |
| 35 | 717138 | 717407 | + | NZ_CP060711.1 | Thermomonas brevis |
| 36 | 28794 | 29069 | + | NZ_CP011367.1 | Thioalkalivibrio versutus |
| 37 | 3677653 | 3677925 | + | NZ_CP035704.1 | Pseudolysobacter antarcticus |
| 38 | 309870 | 310148 | - | NC_017033.1 | Frateuria aurantia DSM 6220 |
| 39 | 3087482 | 3087754 | - | NC_011901.1 | Thioalkalivibrio sulfidiphilus HL-EbGr7 |
| 40 | 68847 | 69116 | + | NZ_CP017415.1 | Acidihalobacter yilgarnenesis |
| 41 | 3486435 | 3486713 | + | NZ_CP041046.1 | Luteibacter pinisoli |
| 42 | 3362023 | 3362301 | + | NZ_CP064030.1 | Dyella caseinilytica |
| 43 | 608397 | 608666 | - | NZ_CP055305.1 | Mannheimia pernigra |
| 44 | 35063 | 35335 | - | NZ_CP006954.1 | Bibersteinia trehalosi USDA-ARS-USMARC-188 |
| 45 | 2206890 | 2207165 | + | NZ_CP007715.1 | Actinobacillus equuli subsp. equuli |
| 46 | 2254182 | 2254457 | + | NZ_CP009159.1 | Actinobacillus suis ATCC 33415 |
| 47 | 314096 | 314368 | + | NZ_CP029347.1 | Saliniradius amylolyticus |
| 48 | 127376 | 127645 | - | NZ_CP006944.1 | Mannheimia varigena USDA-ARS-USMARC-1312 |
| 49 | 564282 | 564551 | - | NZ_CP046531.1 | Mannheimia ovis |
| 50 | 3864000 | 3864272 | + | NC_012962.1 | Photorhabdus asymbiotica |
| 51 | 2385720 | 2385986 | + | NZ_CP015249.1 | Dokdonella koreensis DS-123 |
| 52 | 4078570 | 4078842 | - | NC_018012.1 | Thiocystis violascens DSM 198 |
| 53 | 763882 | 764154 | - | NZ_CP028926.1 | Pasteurella multocida |
| 54 | 2116158 | 2116430 | + | NC_006512.1 | Idiomarina loihiensis L2TR |
| 55 | 884273 | 884557 | + | NZ_CP015425.1 | [Haemophilus] ducreyi |
| 56 | 2017778 | 2018053 | + | NZ_CP030753.1 | Actinobacillus pleuropneumoniae |
| 57 | 1693851 | 1694123 | - | NZ_LT906448.1 | Pasteurella dagmatis |
| 58 | 2602578 | 2602850 | + | NZ_CP023529.1 | Lelliottia amnigena |
| 59 | 362701 | 362976 | - | NZ_CP012268.1 | Cronobacter muytjensii ATCC 51329 |
| 60 | 4075441 | 4075716 | - | NZ_CP027107.1 | Cronobacter sakazakii |
| 61 | 510421 | 510696 | - | NZ_CP013940.1 | Cronobacter malonaticus LMG 23826 |
| 62 | 2128030 | 2128302 | + | NZ_CP040863.1 | Rodentibacter heylii |
| 63 | 1353190 | 1353462 | - | NC_005126.1 | Photorhabdus laumondii subsp. laumondii TTO1 |
| 64 | 3273879 | 3274151 | + | NC_013892.1 | Xenorhabdus bovienii SS-2004 |
| 65 | 660775 | 661047 | - | NC_013961.1 | Erwinia amylovora CFBP1430 |
| 66 | 3771418 | 3771690 | + | NZ_AP023184.1 | Buttiauxella agrestis |
| 67 | 146158 | 146427 | + | NC_021883.1 | Mannheimia haemolytica USMARC_2286 |
| 68 | 1790293 | 1790544 | + | NZ_CP014671.1 | Immundisolibacter cernigliae |
| 69 | 1973861 | 1974136 | - | NZ_CP016180.1 | Pasteurella skyensis |
| 70 | 3406263 | 3406535 | + | NZ_CP031416.1 | Gallaecimonas mangrovi |
| 71 | 2254448 | 2254720 | - | NC_019940.1 | Thioflavicoccus mobilis 8321 |
| 72 | 3597732 | 3598007 | + | NZ_CP012257.1 | Cronobacter universalis NCTC 9529 |
| 73 | 3686563 | 3686838 | + | NZ_CP012264.1 | Cronobacter condimenti 1330 |
| 74 | 820748 | 821023 | - | NZ_CP060111.1 | Klebsiella michiganensis |
| 75 | 522581 | 522856 | + | NZ_CP015029.1 | Frederiksenia canicola |
| 76 | 1016141 | 1016413 | - | NZ_CP025799.1 | Dickeya zeae |
| 77 | 2167786 | 2168061 | - | NZ_CP015031.1 | Basfia succiniciproducens |
| 78 | 1960879 | 1961154 | - | NZ_CP016605.1 | Bisgaardia hudsonensis |
| 79 | 3489807 | 3490079 | - | NZ_CP014136.1 | Gibbsiella quercinecans |
| 80 | 3926452 | 3926724 | + | NZ_CP017184.1 | Enterobacter roggenkampii |
| 81 | 4256558 | 4256830 | + | NZ_CP043318.1 | Enterobacter chengduensis |
| 82 | 685979 | 686251 | - | NZ_CP023567.1 | Erwinia pyrifoliae |
| 83 | 3774812 | 3775087 | + | NZ_CP012266.1 | Cronobacter dublinensis subsp. dublinensis LMG 23823 |
| 84 | 2456629 | 2456904 | - | NZ_CP042941.1 | Atlantibacter hermannii |
| 85 | 294876 | 295151 | - | NC_006300.1 | [Mannheimia] succiniciproducens MBEL55E |
| 86 | 1067067 | 1067351 | + | NZ_CP012373.2 | Beggiatoa leptomitoformis |
| 87 | 3900512 | 3900784 | + | NC_015968.1 | Enterobacter soli |
| 88 | 3368040 | 3368312 | - | NZ_CP025034.2 | Enterobacter sp. SGAir0187 |
| 89 | 3998020 | 3998292 | + | NZ_CP009756.1 | Enterobacter cloacae |
| 90 | 4461159 | 4461431 | - | NZ_CP017279.1 | Enterobacter ludwigii |
| 91 | 1977136 | 1977414 | + | NZ_CP016604.1 | Otariodibacter oris |
| 92 | 2633509 | 2633781 | + | NZ_CP016414.1 | Vibrio scophthalmi |
| 93 | 3172315 | 3172587 | + | NC_010694.1 | Erwinia tasmaniensis Et1/99 |
| 94 | 3178117 | 3178389 | + | NZ_CP042220.2 | Dickeya poaceiphila |
| 95 | 410091 | 410363 | + | NZ_CP036536.1 | Salinimonas lutimaris |
| 96 | 1650554 | 1650826 | + | NZ_AP019007.1 | Enterobacter oligotrophicus |
| 97 | 2154717 | 2154992 | + | NZ_CP018804.1 | Histophilus somni |
| 98 | 1721146 | 1721418 | + | NZ_CP009460.1 | Dickeya fangzhongdai |
| 99 | 1285162 | 1285437 | + | NC_011852.1 | Glaesserella parasuis SH0165 |
| 100 | 677825 | 678097 | - | NZ_CP029185.2 | Limnobaculum parvum |
| 101 | 524519 | 524791 | - | NZ_LS483470.1 | Leminorella richardii |
| 102 | 162330 | 162605 | - | NZ_CP025120.1 | Kangiella profundi |
| 103 | 1097487 | 1097759 | - | NC_014500.1 | Dickeya dadantii 3937 |
| 104 | 762414 | 762689 | - | NZ_LR134475.1 | Klebsiella aerogenes |
| 105 | 735670 | 735945 | - | NZ_CP065838.1 | Klebsiella quasipneumoniae |
| 106 | 4496498 | 4496773 | + | NC_016845.1 | Klebsiella pneumoniae subsp. pneumoniae HS11286 |
| 107 | 759609 | 759884 | - | NZ_CP054254.1 | Klebsiella variicola |
| 108 | 902293 | 902568 | - | NZ_CP036175.1 | Klebsiella huaxiensis |
| 109 | 3648844 | 3649116 | + | NC_012912.1 | Dickeya chrysanthemi Ech1591 |
| 110 | 722309 | 722584 | - | NZ_CP054058.1 | Scandinavium goeteborgense |
| 111 | 3898987 | 3899259 | + | NZ_CP027986.1 | Enterobacter sichuanensis |
| 112 | 3358360 | 3358632 | + | NZ_LT615367.1 | Dickeya aquatica |
| 113 | 827916 | 828188 | - | NZ_CP015581.1 | Tatumella citrea |
| 114 | 748220 | 748492 | - | NZ_CP034035.1 | Brenneria rubrifaciens |
| 115 | 212489 | 212764 | - | NC_013166.1 | Kangiella koreensis DSM 16069 |
| 116 | 1087088 | 1087363 | + | NZ_CP053416.1 | Salmonella bongori |
| 117 | 3269772 | 3270047 | + | NC_003197.2 | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 |
| 118 | 3856530 | 3856802 | + | NZ_AP022508.1 | Enterobacter bugandensis |
| 119 | 4096735 | 4097007 | + | NC_014306.1 | Erwinia billingiae Eb661 |
| 120 | 3140408 | 3140680 | + | NZ_LN907827.1 | Erwinia gerundensis |
| 121 | 2615996 | 2616268 | + | NZ_CP067057.1 | Rahnella aceris |
| 122 | 631134 | 631406 | + | NZ_CP065640.1 | Serratia rubidaea |
| 123 | 705494 | 705766 | - | NZ_CP034752.1 | Jinshanibacter zhutongyuii |
| 124 | 3324536 | 3324808 | + | NZ_CP034148.1 | Pantoea agglomerans |
| 125 | 767280 | 767552 | - | NZ_CP045720.1 | Pantoea eucalypti |
| 126 | 744542 | 744814 | - | NZ_CP038853.1 | Pantoea vagans |
| 127 | 972132 | 972398 | - | NZ_LS483422.1 | Providencia heimbachae |
| 128 | 297736 | 298008 | + | NZ_CP040428.1 | Jejubacter calystegiae |
| 129 | 2981776 | 2982048 | - | NZ_AP018724.1 | Sulfurivermis fontis |
| 130 | 3444596 | 3444871 | + | NZ_CP012621.1 | Zobellella denitrificans |
| 131 | 2062009 | 2062281 | + | NZ_CP049115.1 | Pantoea stewartii |
| 132 | 2283241 | 2283516 | - | NZ_CP021377.1 | Oceanisphaera profunda |
| 133 | 975312 | 975581 | - | NZ_CP048796.1 | Providencia vermicola |
| 134 | 371702 | 371974 | - | NZ_CP015749.1 | Pectobacterium parmentieri |
| 135 | 2134704 | 2134976 | + | NC_013851.1 | Allochromatium vinosum DSM 180 |
| 136 | 4470487 | 4470759 | - | NZ_CP045769.1 | Enterobacter cancerogenus |
| 137 | 1122199 | 1122471 | - | NZ_FO704550.1 | Xenorhabdus doucetiae |
| 138 | 892214 | 892486 | - | NC_017554.1 | Pantoea ananatis PA13 |
| 139 | 238260 | 238532 | + | NZ_CP060401.1 | Xenorhabdus nematophila |
| 140 | 3797492 | 3797767 | + | NZ_CP012871.1 | [Enterobacter] lignolyticus |
| 141 | 887213 | 887485 | - | NZ_CP040990.1 | Vibrio furnissii |
| 142 | 3399755 | 3400024 | - | NZ_LR134374.1 | Legionella spiritensis |
| 143 | 11656 | 11925 | - | NZ_LR134374.1 | Legionella spiritensis |
| 144 | 572364 | 572645 | + | NZ_LR134510.1 | Actinobacillus delphinicola |
| 145 | 3187415 | 3187687 | - | NZ_CP015137.1 | Dickeya solani IPO 2222 |
| 146 | 1116616 | 1116888 | - | NZ_CP038498.1 | Pectobacterium punjabense |
| 147 | 3752769 | 3753041 | + | NZ_CP051652.1 | Pectobacterium carotovorum |
| 148 | 3939550 | 3939822 | + | NZ_CP065044.1 | Pectobacterium aroidearum |
| 149 | 1182840 | 1183112 | - | NZ_CP034938.1 | Pectobacterium odoriferum |
| 150 | 4910017 | 4910289 | - | NZ_CP017482.1 | Pectobacterium polaris |
| 151 | 3003138 | 3003410 | - | NZ_CP015750.1 | Pectobacterium wasabiae CFBP 3304 |
| 152 | 1125339 | 1125611 | - | NZ_CP072133.1 | Pseudoalteromonas xiamenensis |
| 153 | 677497 | 677769 | - | NC_017910.1 | Shimwellia blattae DSM 4481 = NBRC 105725 |
| 154 | 564814 | 565083 | + | NZ_CP007445.1 | Gilliamella apicola |
| 155 | 29714 | 29986 | - | NZ_AP019657.1 | Vibrio ponticus |
| 156 | 545843 | 546118 | - | NZ_CP023525.1 | Cedecea neteri |
| 157 | 1372058 | 1372333 | + | NZ_CP046793.1 | Vibrio metschnikovii |
| 158 | 562943 | 563218 | - | NZ_LR134201.1 | Cedecea lapagei |
| 159 | 3201734 | 3202009 | + | NZ_CP046268.1 | Vibrio spartinae |
| 160 | 2358769 | 2359041 | + | NZ_CP014035.2 | Vibrio fluvialis |
| 161 | 106218 | 106487 | + | NZ_CP023536.1 | Providencia alcalifaciens |
| 162 | 592896 | 593168 | + | NZ_CP047495.1 | Pectobacterium brasiliense |
| 163 | 248708 | 248989 | + | NZ_CP046415.1 | Guyparkeria halophila |
| 164 | 953019 | 953291 | + | NZ_CP032090.1 | Pseudoalteromonas donghaensis |
| 165 | 1083041 | 1083313 | - | NZ_CP009125.1 | Pectobacterium atrosepticum |
| 166 | 437755 | 438027 | - | NZ_AP014635.1 | Vibrio tritonius |
| 167 | 2026453 | 2026722 | + | NZ_LT906451.1 | Legionella lansingensis |
| 168 | 3788400 | 3788672 | + | NZ_CP034036.1 | Brenneria nigrifluens DSM 30175 = ATCC 13028 |
| 169 | 799848 | 800120 | - | NZ_CP005974.1 | Photobacterium gaetbulicola Gung47 |
| 170 | 174710 | 174982 | - | NZ_CP007031.1 | Marichromatium purpuratum 984 |
| 171 | 1078835 | 1079107 | - | NZ_CP031560.1 | Dickeya dianthicola |
| 172 | 4181810 | 4182079 | + | NZ_CP029736.1 | Providencia rettgeri |
| 173 | 358353 | 358622 | - | NZ_CP031123.2 | Providencia huaxiensis |
| 174 | 2630443 | 2630715 | + | NZ_AP019651.1 | Vibrio taketomensis |
| 175 | 360012 | 360284 | - | NZ_AP014524.1 | Vibrio cholerae MS6 |
| 176 | 1657369 | 1657644 | + | NZ_CP013816.1 | Piscirickettsia salmonis |
| 177 | 741543 | 741815 | + | NZ_CP011028.1 | Pseudoalteromonas espejiana DSM 9414 |
| 178 | 769733 | 770005 | + | NZ_CP014056.2 | Grimontia hollisae |
| 179 | 4083413 | 4083688 | + | NZ_CP063425.1 | Kosakonia pseudosacchari |
| 180 | 1955235 | 1955507 | - | NZ_CP023009.1 | Lonsdalea britannica |
| 181 | 2993554 | 2993826 | - | NZ_CP027523.1 | Pseudoalteromonas carrageenovora |
| 182 | 2961202 | 2961474 | - | NZ_CP023464.1 | Pseudoalteromonas atlantica |
| 183 | 722537 | 722812 | + | NZ_CP061527.1 | Shigella dysenteriae |
| 184 | 3587646 | 3587921 | + | NZ_LR134340.1 | Escherichia marmotae |
| 185 | 1996028 | 1996303 | + | NZ_CP057657.1 | Escherichia fergusonii |
| 186 | 3046191 | 3046466 | + | NC_004337.2 | Shigella flexneri 2a str. 301 |
| 187 | 3104093 | 3104368 | + | NC_000913.3 | Escherichia coli str. K-12 substr. MG1655 |
| 188 | 3045086 | 3045361 | + | NZ_AP014857.1 | Escherichia albertii |
| 189 | 3845814 | 3846089 | + | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
| 190 | 4964566 | 4964838 | + | NZ_CP045205.1 | Citrobacter telavivensis |
| 191 | 3121142 | 3121414 | + | NZ_CP014137.1 | Brenneria goodwinii |
| 192 | 113554 | 113826 | - | NZ_CP035688.1 | Vibrio metoecus |
| 193 | 393449 | 393721 | - | NZ_CP045350.1 | Vibrio aquimaris |
| 194 | 824727 | 824999 | - | NZ_CP013990.1 | Leclercia adecarboxylata |
| 195 | 2858293 | 2858565 | - | NZ_CP009888.1 | Pseudoalteromonas piratica |
| 196 | 705532 | 705804 | + | NZ_CP033065.1 | Pseudoalteromonas agarivorans |
| 197 | 785383 | 785658 | - | NZ_CP045845.1 | Kluyvera intermedia |
| 198 | 4196719 | 4196994 | - | NZ_CP038469.1 | Citrobacter tructae |
| 199 | 2159413 | 2159688 | - | NZ_LT556085.1 | Citrobacter amalonaticus |
| 200 | 4565581 | 4565853 | - | NC_016112.1 | Methylotuvimicrobium alcaliphilum 20Z |
| 201 | 4893405 | 4893677 | - | NZ_CP035467.1 | Methylotuvimicrobium buryatense |
| 202 | 4478474 | 4478746 | + | NZ_CP048784.1 | Serratia liquefaciens |
| 203 | 2041029 | 2041304 | + | NZ_LR699119.1 | Aquicella siphonis |
| 204 | 928824 | 929096 | - | NZ_CP065534.1 | Lonsdalea populi |
| 205 | 5277979 | 5278251 | - | NC_013716.1 | Citrobacter rodentium ICC168 |
| 206 | 692967 | 693239 | - | NZ_CP071320.1 | Serratia ureilytica |
| 207 | 3713550 | 3713822 | + | NZ_CP016948.1 | Serratia surfactantfaciens |
| 208 | 4428167 | 4428439 | + | NZ_CP038662.1 | Serratia nematodiphila |
| 209 | 4542234 | 4542506 | + | NC_015567.1 | Serratia plymuthica AS9 |
| 210 | 502834 | 503106 | - | NZ_CP031781.1 | Vibrio parahaemolyticus |
| 211 | 4479359 | 4479631 | + | NZ_LR134494.1 | Serratia quinivorans |
| 212 | 4410945 | 4411217 | + | NZ_LT906479.1 | Serratia ficaria |
| 213 | 4017140 | 4017415 | + | NC_009792.1 | Citrobacter koseri ATCC BAA-895 |
| 214 | 2210785 | 2211054 | + | NZ_CP016397.1 | Legionella clemsonensis |
| 215 | 639643 | 639915 | + | NZ_CP011041.1 | Pseudoalteromonas tetraodonis |
| 216 | 701037 | 701309 | + | NZ_CP011030.1 | Pseudoalteromonas issachenkonii |
| 217 | 737033 | 737308 | - | NZ_CP035129.1 | Kosakonia cowanii |
| 218 | 2602370 | 2602645 | + | NZ_CP020373.1 | Shewanella khirikhana |
| 219 | 3229340 | 3229609 | - | NZ_CP044098.1 | Citrobacter portucalensis |
| 220 | 1875704 | 1875973 | + | NZ_CP033744.1 | Citrobacter freundii |
| 221 | 2748065 | 2748337 | + | NZ_CP030788.1 | Vibrio campbellii |
| 222 | 296711 | 296983 | - | NZ_CP018312.1 | Vibrio rotiferianus |
| 223 | 3307130 | 3307402 | + | NZ_CP009467.1 | Vibrio harveyi |
| 224 | 530050 | 530325 | - | NZ_CP028897.1 | Dongshaea marina |
| 225 | 2236529 | 2236798 | - | NZ_CP040602.1 | Thiomicrorhabdus sediminis |
| 226 | 138469 | 138741 | + | NZ_AP020335.1 | Hydrogenovibrio marinus |
| 227 | 2527500 | 2527760 | - | NZ_CP011412.1 | Sedimenticola thiotaurini |
| 228 | 1823970 | 1824239 | - | NC_015581.1 | Thiomicrospira cyclica ALM1 |
| 229 | 2022436 | 2022705 | - | NZ_CP007030.1 | Thiomicrospira aerophila AL3 |
| 230 | 2550523 | 2550792 | - | NZ_AP021889.1 | Thiosulfatimonas sediminis |
| 231 | 208149 | 208421 | + | NZ_CP035033.1 | Hydrogenovibrio thermophilus |
| 232 | 248675 | 248944 | - | NZ_AP014630.1 | Acinetobacter guillouiae |
| 233 | 192838 | 193059 | - | NC_022664.1 | Spiribacter curvatus |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_012962.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF14815.8 | 0.97 | 224 | 11.0 | same-strand | NUDIX domain |
| 2 | PF00730.27 | 0.97 | 225 | 11.0 | same-strand | HhH-GPD superfamily base excision DNA repair protein |
| 3 | PF00633.25 | 0.94 | 216 | 11 | same-strand | Helix-hairpin-helix motif |
| 4 | PF11873.10 | 0.64 | 147 | 55.0 | same-strand | Membrane-bound lytic murein transglycosylase C, N-terminal domain |
| 5 | PF01464.22 | 0.64 | 147 | 55.0 | same-strand | Transglycosylase SLT domain |
| 6 | PF02390.19 | 0.65 | 151 | 1248.5 | opposite-strand | Putative methyltransferase |
++ More..